Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4456326 Kineococcus radiotolerans SRS30216, complete genome

Start: 4456326, End: 4457084, Length: 759

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009480:31412:400544005440860807Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative sugar phosphate isomerase/epimerase8e-95346
NC_014391:3445672:344920934492093450150942Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeXylose isomerase domain-containing protein TIM barrel1e-1067
NC_013171:1731491:173537017353701736224855Anaerococcus prevotii DSM 20548, complete genomeXylose isomerase domain protein TIM barrel4e-0962
NC_013730:3208571:321303832130383213889852Spirosoma linguale DSM 74, complete genomeXylose isomerase domain protein TIM barrel9e-0960.8
NC_009523:5522447:552244755224475523199753Roseiflexus sp. RS-1 chromosome, complete genomexylose isomerase domain-containing protein4e-0858.5
NC_014500:3519722:351972235197223520576855Dickeya dadantii 3937 chromosome, complete genomeSugar phosphate isomerase/epimerase1e-0756.6
NC_014732:141000:159300159300160025726Halogeometricum borinquense DSM 11551 plasmid pHBOR04, completesugar phosphate isomerase/epimerase2e-0653.1
NC_015577:1462874:147358114735811474396816Treponema azotonutricium ZAS-9 chromosome, complete genomesugar phosphate isomerase/epimerase2e-0652.8