Pre_GI: BLASTP Hits

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Query: NC_009664:3718927:3738366 Kineococcus radiotolerans SRS30216, complete genome

Start: 3738366, End: 3738644, Length: 279

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014151:2312000:231582423158242316105282Cellulomonas flavigena DSM 20109 chromosome, complete genometranscriptional regulator, AsnC family4e-30129
NC_015671:1540860:155791015579101558203294Cellvibrio gilvus ATCC 13127 chromosome, complete genometranscription regulator AsnC-type-like protein3e-28123
NC_014210:3742112:375625937562593756534276Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, AsnC family2e-27121
NC_015514:2414617:242008824200882420381294Cellulomonas fimi ATCC 484 chromosome, complete genometranscription regulator AsnC-type-like protein3e-27120
NC_021177:1922930:192551719255171925798282Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator1e-25114
NC_010572:6293417:631228563122856312566282Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative AsnC-family transcriptional regulator3e-25113
NC_015588:1965787:196939219693921969670279Isoptericola variabilis 225 chromosome, complete genomeTranscription regulator, AsnC-type5e-25112
NC_018750:2005229:200776720077672008048282Streptomyces venezuelae ATCC 10712, complete genomeTranscriptional regulator, AsnC family3e-24110
NC_010617:1428902:143383014338301434126297Kocuria rhizophila DC2201, complete genomehypothetical protein2e-24110
NC_012803:1302261:130494213049421305223282Micrococcus luteus NCTC 2665, complete genometranscriptional regulator, AsnC family1e-2098.2
NC_013169:1661135:166289916628991663180282Kytococcus sedentarius DSM 20547, complete genometranscriptional regulator, AsnC family2e-1994.4
NC_009523:1365717:138375913837591384037279Roseiflexus sp. RS-1 chromosome, complete genomeAsnC family transcriptional regulator5e-1786.3
NC_008025:2407618:240823124082312408524294Deinococcus geothermalis DSM 11300, complete genomeputative transcriptional regulator, AsnC family8e-1785.9
NC_013926:614206:616364616364616729366Aciduliprofundum boonei T469 chromosome, complete genometranscriptional regulator, AsnC family1e-0755.1