Pre_GI: BLASTP Hits

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Query: NC_009664:3245210:3262066 Kineococcus radiotolerans SRS30216, complete genome

Start: 3262066, End: 3263007, Length: 942

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008596:6009511:6044958604495860459921035Mycobacterium smegmatis str. MC2 155, complete genomeglycosyl transferase, putative6e-45181
NC_014550:1581812:158779715877971588249453Arthrobacter arilaitensis Re117, complete genomeoligosaccharide biosynthesis Alg14-like protein1e-1273.9
NC_016023:915178:943738943738944220483Bacillus coagulans 36D1 chromosome, complete genomeglycosyltransferase 28 domain-containing protein9e-1167.8
NC_013715:1750403:176102017610201761502483Rothia mucilaginosa DY-18, complete genomeUDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase1e-1067.8
NC_008532:973510:988715988715989191477Streptococcus thermophilus LMD-9, complete genomeUDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase2e-1067
NC_006448:957830:975038975038975523486Streptococcus thermophilus LMG 18311, complete genomeexopolysaccharide biosynthesis protein, glycosyltransferase2e-1067
NC_009953:2106572:211097021109702111611642Salinispora arenicola CNS-205 chromosome, complete genomeglycosyltransferase family 28 protein3e-1066.2
NC_008054:1649160:167588516758851676388504Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIG, Putative glycosyltransferase4e-1065.9
NC_011529:1722829:174070717407071741186480Thermococcus onnurineus NA1, complete genomebeta-1,4-galactosyltransferase5e-1065.5
NC_013715:1750403:176178017617801762490711Rothia mucilaginosa DY-18, complete genomehypothetical protein9e-1064.7
NC_006448:957830:975523975523975972450Streptococcus thermophilus LMG 18311, complete genomeexopolysaccharide biosynthesis protein, glycosyltransferase1e-0963.9
NC_008529:1663000:168486216848621685356495Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeGlycosyltransferase, family 282e-0963.5
NC_012466:318675:318182318182318685504Streptococcus pneumoniae JJA, complete genomess-1,4-galactosyltransferase4e-0962.4
NC_020304:3751710:375814037581403758619480Desulfocapsa sulfexigens DSM 10523, complete genomehypothetical protein6e-0961.6
NC_009953:2106572:211039921103992110881483Salinispora arenicola CNS-205 chromosome, complete genomeoligosaccharide biosynthesis protein Alg14-like protein6e-0961.6
NC_020291:1266885:130641113064111306887477Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeUDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase2e-0860.5
NC_008532:973510:988212988212988703492Streptococcus thermophilus LMD-9, complete genomeGlycosyltransferase, family 282e-0860.1
NC_015690:977131:995879995879996367489Paenibacillus mucilaginosus KNP414 chromosome, complete genomeEpsH2e-0859.7
NC_012522:5987644:600050860005086001029522Rhodococcus opacus B4, complete genomeputative glycosyltransferase4e-0859.3
NC_017217:1607679:164670716467071647207501Bifidobacterium animalis subsp. lactis V9 chromosome, completeglycosyltransferase 28-like protein5e-0858.9
NC_017216:1603000:164106616410661641566501Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycosyltransferase 28-like protein5e-0858.9
NC_012814:1599241:164142016414201641920501Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycosyltransferase 28-like protein5e-0858.9
NC_012815:1603916:164113816411381641638501Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycosyltransferase 28-like protein5e-0858.9
NC_017214:299637:338637338637339149513Bifidobacterium animalis subsp. lactis BB-12 chromosome, completebeta-D-Glcp beta-1,4-glucuronosyltransferase6e-0858.5
NC_017215:1605917:164604216460421646554513Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase6e-0858.5
NC_020291:1266885:130688713068871307372486Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglycosyltransferase 285e-0858.5
NC_009077:1027357:104200910420091042488480Mycobacterium sp. JLS, complete genomeGlycosyltransferase 28, C-terminal domain9e-0857.8
NC_010994:3477000:349211734921173492593477Rhizobium etli CIAT 652, complete genomepolysaccharide biosynthesis glucuronosyltransferase protein4e-0755.5
NC_011369:3022235:303509430350943035570477Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeglycosyltransferase family 28 protein7e-0755.1
NC_018876:2305659:233107823310782331548471Methanolobus psychrophilus R15 chromosome, complete genomebeta-1,4-galactosyltransferase2e-0653.5
NC_014550:1581812:158824615882461588827582Arthrobacter arilaitensis Re117, complete genomeputative family 28 glycosyl transferase3e-0652.8