Pre_GI: BLASTP Hits

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Query: NC_009664:3245210:3249933 Kineococcus radiotolerans SRS30216, complete genome

Start: 3249933, End: 3251060, Length: 1128

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013524:1207845:1211575121157512127471173Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeglycosyl transferase group 14e-30132
NC_014831:786011:7877447877447888921149Thermaerobacter marianensis DSM 12885 chromosome, complete genomeglycosyl transferase group 16e-29128
NC_016604:1285277:1300310130031013013981089Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein2e-28126
NC_008228:1404126:1431559143155914326411083Pseudoalteromonas atlantica T6c, complete genomeglycosyl transferase, group 11e-23110
NC_008312:6347500:6362652636265263637011050Trichodesmium erythraeum IMS101, complete genomeglycosyl transferase, group 14e-23109
NC_007086:1988000:2002280200228020033291050Xanthomonas campestris pv. campestris str. 8004, complete genomeGumI protein2e-1997.1
NC_003902:2903493:2907890290789029089391050Xanthomonas campestris pv. campestris str. ATCC 33913, completeGumI protein2e-1997.1
NC_017271:2906000:2910424291042429114731050Xanthomonas campestris pv. raphani 756C chromosome, completeexopolysaccharide xanthan biosynthesis glycosyltransferase GumI2e-1997.1
NC_011138:1374520:1390259139025913913441086Alteromonas macleodii 'Deep ecotype', complete genomepredicted glycosyltransferase1e-1687.8
NC_015174:5157355:5162540516254051636041065Planctomyces brasiliensis DSM 5305 chromosome, complete genomeglycosyl transferase group 13e-1169.7
NC_007947:2140000:2154294215429421554421149Methylobacillus flagellatus KT, complete genomeglycosyl transferase, group 17e-1065.5
NC_014830:1252249:1265171126517112662351065Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein1e-0861.2
NC_009484:661089:6638776638776650191143Acidiphilium cryptum JF-5 chromosome, complete genomegroup 1 glycosyl transferase6e-0652.4