Pre_GI: BLASTP Hits

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Query: NC_009664:1569335:1605591 Kineococcus radiotolerans SRS30216, complete genome

Start: 1605591, End: 1605824, Length: 234

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008146:1016446:101771410177141018157444Mycobacterium sp. MCS, complete genomeSecE subunit of protein translocation complex3e-0753.9
NC_008705:1022252:102352010235201023963444Mycobacterium sp. KMS, complete genometranscriptional regulator, Fis family3e-0753.9
NC_009077:1027357:103213710321371032580444Mycobacterium sp. JLS, complete genometranscriptional regulator, Fis family3e-0753.5
NC_016111:3769818:377381637738163774121306Streptomyces cattleya NRRL 8057, complete genomePreprotein translocase subunit secE4e-0753.5
NC_010572:3363830:337975533797553380042288Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative preprotein translocase SecE5e-0649.7
NC_003888:5042283:507139650713965071680285Streptomyces coelicolor A3(2), complete genomepreprotein translocase SecE subunit6e-0649.3
NC_015957:639774:664671664671664904234Streptomyces violaceusniger Tu 4113 chromosome, complete genomepreprotein translocase subunit SecE7e-0649.3
NC_018750:4688968:469412246941224694409288Streptomyces venezuelae ATCC 10712, complete genomePreprotein translocase subunit SecE7e-0649.3
NC_021177:4912982:491820549182054918492288Streptomyces fulvissimus DSM 40593, complete genomePreprotein translocase subunit SecE8e-0649.3