Pre_GI: BLASTP Hits

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Query: NC_009656:6224221:6251515 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 6251515, End: 6252531, Length: 1017

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:3874844:389960138996013900122522Pseudomonas poae RE*1-1-14, complete genometranscriptional factor2e-45182
NC_008789:1393526:1396145139614513971461002Halorhodospira halophila SL1, complete genometranscriptional regulator-like protein5e-42171
NC_007908:3363902:3372013337201333730621050Rhodoferax ferrireducens T118, complete genometranscriptional factor2e-41169
NC_013889:1159343:1190311119031111913421032Thioalkalivibrio sp. K90mix chromosome, complete genometranscriptional regulator-like protein6e-39161
NC_011901:1860887:190271019027101903708999Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetranscriptional regulator8e-39161
NC_008740:1459747:1462391146239114633981008Marinobacter aquaeolei VT8, complete genometranscriptional regulator-like protein5e-38158
NC_015581:680460:6857516857516867881038Thioalkalimicrobium cyclicum ALM1 chromosome, complete genometranscriptional regulator-like protein2e-37156
NC_011071:429204:4427104427104437141005Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator-like protein2e-32139
NC_009434:3611738:3742770374277037437861017Pseudomonas stutzeri A1501, complete genometranscriptional factor MdcH1e-31137
NC_016147:3349272:335426833542683355230963Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein2e-31137
NC_012791:4794362:483328048332804834260981Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein4e-31135
NC_008576:3812500:3818614381861438196241011Magnetococcus sp. MC-1, complete genometranscriptional factor5e-31135
NC_015740:3631326:3660370366037036613891020Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetranscriptional factor MdcH2e-30132
NC_011206:262844:2720422720422730731032Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional factor MdcH9e-30130
NC_010814:4099:251002510026092993Geobacter lovleyi SZ, complete genometranscriptional regulator-like protein3e-29129
NC_009665:2602000:2609537260953726105711035Shewanella baltica OS185 chromosome, complete genometranscriptional factor MdcH7e-28124
NC_008782:841134:856530856530857519990Acidovorax sp. JS42, complete genomehypothetical protein3e-27122
NC_008322:2077628:2097080209708020981231044Shewanella sp. MR-7, complete genometranscriptional regulator-like protein5e-27122
NC_011901:1860887:1874281187428118753721092Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetranscriptional regulator5e-2098.6
NC_016002:2946702:2978327297832729793431017Pseudogulbenkiania sp. NH8B, complete genometranscriptional regulator-like protein5e-1685.5
NC_013946:305364:305364305364306329966Meiothermus ruber DSM 1279 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein2e-0860.1
NC_015740:3678342:368978936897893690343555Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetranscriptional regulator-like protein1e-0757.8
NC_007969:1095438:1123740112374011248581119Psychrobacter cryohalolentis K5, complete genomeputative transcription factor1e-0757.4
NC_013890:1175931:119468111946811195673993Dehalococcoides sp. GT chromosome, complete genomeHelix-turn-helix type 11 domain protein4e-0755.8
NC_015388:1020747:1034148103414810351701023Desulfobacca acetoxidans DSM 11109 chromosome, complete genomehypothetical protein2e-0653.9
NC_015388:2143329:2160933216093321619461014Desulfobacca acetoxidans DSM 11109 chromosome, complete genomehypothetical protein2e-0653.5
NC_019978:922978:938698938698939693996Halobacteroides halobius DSM 5150, complete genomeputative transcriptional regulator3e-0653.1
NC_009337:89631:1043701043701053951026Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein4e-0652.4