Pre_GI: BLASTP Hits

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Query: NC_009656:4527457:4594078 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 4594078, End: 4594431, Length: 354

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:2351464:237594023759402376296357Pseudomonas mendocina NK-01 chromosome, complete genomeregulatory protein3e-1063.9
NC_007963:1552761:156075215607521561435684Chromohalobacter salexigens DSM 3043, complete genomeputative phage repressor1e-0962
NC_008781:3508784:351732735173273517707381Polaromonas naphthalenivorans CJ2, complete genomeputative transcriptional regulator, XRE family2e-0961.2
NC_012721:2694829:270527527052752705745471Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-0858.5
NC_004129:4093610:411130241113024111682381Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, Cro/CI family2e-0858.2
NC_002927:3827211:386010438601043860469366Bordetella bronchiseptica RB50, complete genomehypothetical protein5e-0856.6
NC_015733:3923800:393966239396623940003342Pseudomonas putida S16 chromosome, complete genomeXRE family transcriptional regulator1e-0755.1
NC_003902:3544743:355177835517783552206429Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein5e-0753.1
NC_014323:961825:975609975609976046438Herbaspirillum seropedicae SmR1 chromosome, complete genomeDNA-binding repressor transcription regulator protein6e-0752.8
NC_011002:703194:709760709760710110351Burkholderia cenocepacia J2315 chromosome 3, complete sequenceputative DNA-binding protein4e-0650.1