Pre_GI: BLASTP Hits

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Query: NC_009654:3849774:3883867 Marinomonas sp. MWYL1, complete genome

Start: 3883867, End: 3884169, Length: 303

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:3505234:350945135094513509756306Azotobacter vinelandii CA6, complete genomeantisigma-factor antagonist STAS domain protein5e-1372.8
NC_012560:3505235:350945235094523509757306Azotobacter vinelandii DJ, complete genomeantisigma-factor antagonist STAS domain protein5e-1372.8
NC_002947:4931476:495443949544394954744306Pseudomonas putida KT2440, complete genomeanti-sigma F factor antagonist, putative1e-1271.6
NC_010501:4080937:410377341037734104078306Pseudomonas putida W619, complete genomeanti-sigma-factor antagonist1e-1168.6