Pre_GI: BLASTP Hits

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Query: NC_009654:2958316:2976302 Marinomonas sp. MWYL1, complete genome

Start: 2976302, End: 2976547, Length: 246

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015276:2804874:281567428156742815919246Marinomonas mediterranea MMB-1 chromosome, complete genomeProtein hfq2e-38157
NC_010995:3640913:365895536589553659221267Cellvibrio japonicus Ueda107, complete genomeHfq protein1e-32137
NC_016513:1185241:118658011865801186876297Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeHost factor-I protein3e-30130
NC_013416:875758:877097877097877393297Aggregatibacter actinomycetemcomitans D11S-1, complete genomeprotein hfq (Host factor-I protein)3e-30130
NC_016632:120500:137636137636137944309Serratia symbiotica str. 'Cinara cedri' chromosome, completeRNA-binding protein Hfq8e-29125
NC_015731:867377:873984873984874229246Nitrosomonas sp. Is79A3 chromosome, complete genomeProtein hfq1e-27121
NC_015222:2136657:214878821487882149033246Nitrosomonas sp. AL212 chromosome, complete genomeRNA chaperone Hfq2e-27120
NC_009257:1023696:103990710399071040236330Francisella tularensis subsp. tularensis WY96-3418 chromosome,host factor I for bacteriophage Q beta replication3e-25113
NC_008601:1094041:111027111102711110600330Francisella tularensis subsp. novicida U112, complete genomehost factor I for bacteriophage Q beta replication3e-25113
NC_008343:1250869:125086912508691251150282Granulibacter bethesdensis CGDNIH1, complete genomeRNA-binding protein, Hfq family4e-1683.2
NC_009454:1389974:138997413899741390225252Pelotomaculum thermopropionicum SI, complete genomehypothetical protein3e-1373.9
NC_012438:1514376:153820515382051538459255Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeRNA chaperone Hfq4e-1373.6
NC_016641:4290350:430267443026744302919246Paenibacillus terrae HPL-003 chromosome, complete genomeHfq protein5e-1373.2
NC_014836:312353:318232318232318462231Desulfurispirillum indicum S5 chromosome, complete genomeRNA chaperone Hfq6e-1372.8
NC_017167:1405626:141191214119121412172261Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1RNA chaperone Hfq9e-1372.4
NC_018866:611588:613380613380613649270Dehalobacter sp. DCA chromosome, complete genomeRNA-binding protein Hfq1e-1272
NC_018867:677848:677848677848678093246Dehalobacter sp. CF chromosome, complete genomeRNA-binding protein Hfq1e-1271.6
NC_014335:3461115:346857534685753468799225Bacillus cereus biovar anthracis str. CI chromosome, completeRNA-binding protein Hfq1e-1168.6
NC_003909:3483244:349117634911763491400225Bacillus cereus ATCC 10987, complete genomeRNA-binding protein Hfq1e-1168.6
NC_011773:3547507:355538035553803555604225Bacillus cereus AH820 chromosome, complete genomeRNA-binding protein Hfq1e-1168.6
NC_012581:709234:722219722219722443225Bacillus anthracis str. CDC 684 chromosome, complete genomeRNA-binding protein Hfq1e-1168.6
NC_008009:5139896:515081651508165151106291Acidobacteria bacterium Ellin345, complete genomeHost factor Hfq3e-1167
NC_021182:2667408:267548426754842675735252Clostridium pasteurianum BC1, complete genomeRNA chaperone Hfq2e-1064.3
NC_014758:1573023:158695215869521587452501Calditerrivibrio nitroreducens DSM 19672 chromosome, completeRNA chaperone hfq9e-0855.8
NC_013939:148706:152329152329152829501Deferribacter desulfuricans SSM1, complete genomesmall nuclear ribonucleoprotein8e-0752.4