Pre_GI: BLASTP Hits

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Query: NC_009512:4408325:4430319 Pseudomonas putida F1, complete genome

Start: 4430319, End: 4430708, Length: 390

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:1153738:116928011692801169678399Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein9e-48188
NC_013406:6494079:650555065055506505930381Paenibacillus sp. Y412MC10 chromosome, complete genomeGtrA family protein9e-1992
NC_007086:4293405:430075243007524301207456Xanthomonas campestris pv. campestris str. 8004, complete genomesugar translocase1e-1685.1
NC_003902:714478:737829737829738284456Xanthomonas campestris pv. campestris str. ATCC 33913, completesugar translocase1e-1685.1
NC_007508:4283750:429108742910874291608522Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative membrane protein involved in synthesis of cell surface polysaccharides2e-1684.7
NC_010688:4235528:424193042419304242370441Xanthomonas campestris pv. campestris, complete genomehypothetical protein3e-1580.5
NC_017271:770000:789965789965790276312Xanthomonas campestris pv. raphani 756C chromosome, completesugar translocase4e-1166.6
NC_014507:1403000:140643514064351406878444Methanoplanus petrolearius DSM 11571 chromosome, complete genomeGtrA family protein2e-0651.2
NC_015428:700479:719202719202719609408Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeGtrA family protein2e-0650.8