Pre_GI: BLASTP Hits

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Query: NC_009512:3282500:3314704 Pseudomonas putida F1, complete genome

Start: 3314704, End: 3315219, Length: 516

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:590844:6042376042376055531317Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative Type IV pilus protein4e-27120
NC_013892:3278647:329832832983283298864537Xenorhabdus bovienii SS-2004 chromosome, complete genomePilL protein (fragment)8e-26116
NC_014029:331919:358410358410359042633Yersinia pestis Z176003 chromosome, complete genomehypothetical protein9e-26116
NC_009832:358291:373757373757374401645Serratia proteamaculans 568, complete genometype IV B pilus protein2e-25115
NC_015567:313035:328376328376329020645Serratia sp. AS9 chromosome, complete genometype IV B pilus protein2e-25115
NC_015566:316340:328211328211328855645Serratia sp. AS12 chromosome, complete genometype IV B pilus protein2e-25115
NC_016830:3869572:392775739277573928299543Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein4e-25114
NC_014228:3391500:342119734211973421733537Xenorhabdus nematophila ATCC 19061, complete genomeputative pilL protein (fragment)1e-24112
NC_013892:1483000:149830414983041498840537Xenorhabdus bovienii SS-2004 chromosome, complete genomePilL protein1e-24112
NC_016845:4539381:454404645440464544615570Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,type IV B pilus protein3e-23107
NC_008463:5246954:5277443527744352785671125Pseudomonas aeruginosa UCBPP-PA14, complete genometype IV B pilus protein7e-23106
NC_020181:3328844:334341233434123343876465Enterobacter aerogenes EA1509E, complete genomePilL1e-22105
NC_009656:4527457:4603026460302646041501125Pseudomonas aeruginosa PA7 chromosome, complete genometype IV B pilus protein2e-22105
NC_018080:5091772:5122434512243451235551122Pseudomonas aeruginosa DK2 chromosome, complete genometype IV B pilus protein2e-22105
NC_007005:1705406:1705406170540617065391134Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein3e-22104
NC_006513:1379735:146161514616151462184570Azoarcus sp. EbN1, complete genomehypothetical protein3e-22104
NC_004129:5373886:5399717539971754008621146Pseudomonas fluorescens Pf-5, complete genomepilL protein1e-21102
NC_005126:1223042:1227913122791312289741062Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein9e-22102
NC_013716:3512950:354470735447073545138432Citrobacter rodentium ICC168, complete genome8e-22102
NC_010002:4544818:455769445576944558272579Delftia acidovorans SPH-1, complete genomeputative secreted protein8e-2199.8
NC_010170:4533416:453812745381274538705579Bordetella petrii, complete genomeputative lipoprotein8e-2199.8
NC_010170:1498253:153070915307091531308600Bordetella petrii, complete genomeputative secreted protein9e-2199.4
NC_012691:2614603:265491526549152655478564Tolumonas auensis DSM 9187, complete genomehypothetical protein1e-2099.4
NC_008825:2525380:254173025417302542311582Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-2098.2
NC_014532:3555550:357098835709883571638651Halomonas elongata DSM 2581, complete genomeK02487 type IV pili sensor histidine kinase/response regulator4e-2097.4
NC_011662:1058794:106346710634671064039573Thauera sp. MZ1T, complete genomehypothetical protein6e-2096.7
NC_012912:483390:517914517914518483570Dickeya zeae Ech1591, complete genomeputative secreted protein1e-1995.9
NC_009138:1974935:201019220101922010812621Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-1995.5
NC_011992:1234610:123873112387311239330600Acidovorax ebreus TPSY, complete genomeputative secreted protein2e-1995.1
NC_008782:2326439:234708123470812347692612Acidovorax sp. JS42, complete genomehypothetical protein1e-1892
NC_012731:600518:618745618745619452708Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative type IV pilus protein2e-1788.6
NC_008344:49039:989569895699537582Nitrosomonas eutropha C91, complete genomehypothetical protein1e-1685.9
NC_015379:2417312:245286824528682453395528Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein, putative exported protein3e-1684.7
NC_008752:558828:575379575379575948570Acidovorax avenae subsp. citrulli AAC00-1, complete genomePilL protein6e-1683.6
NC_015572:2186394:219623621962362196805570Methylomonas methanica MC09 chromosome, complete genomehypothetical protein1e-1272.8
NC_008739:41793:438064380644255450Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencePilL protein7e-1270.1
NC_007484:667879:675757675757676251495Nitrosococcus oceani ATCC 19707, complete genomePilL protein6e-1063.5