Pre_GI: BLASTP Hits

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Query: NC_009512:3282500:3312372 Pseudomonas putida F1, complete genome

Start: 3312372, End: 3312905, Length: 534

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:3869572:393012839301283930709582Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein1e-55215
NC_009656:4527457:461591446159144616402489Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein4e-46183
NC_008463:5246954:529022752902275290766540Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein8e-44176
NC_018080:5091772:513513351351335135612480Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-43175
NC_004129:5373886:541271754127175413166450Pseudomonas fluorescens Pf-5, complete genomehypothetical protein5e-41166
NC_008782:2326439:236174123617412362292552Acidovorax sp. JS42, complete genomehypothetical protein6e-40163
NC_008825:2525380:253052825305282531079552Methylibium petroleiphilum PM1, complete genomehypothetical protein5e-40163
NC_014532:3596097:361154136115413612128588Halomonas elongata DSM 2581, complete genomehypothetical protein4e-40163
NC_007005:1636875:165669816566981657270573Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein3e-39160
NC_013716:3512950:354525935452593545675417Citrobacter rodentium ICC168, complete genomehypothetical protein6e-37153
NC_020181:3328844:334287533428753343291417Enterobacter aerogenes EA1509E, complete genomeFIG051360: Periplasmic protein TonB, links inner and outer membranes7e-37152
NC_015379:2417312:245399424539942454479486Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein6e-35146
NC_012731:600518:619970619970620413444Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-33141
NC_008752:585884:592133592133593056924Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein2e-27122
NC_010170:1103224:111857611185761119493918Bordetella petrii, complete genomehypothetical protein2e-27121
NC_008782:1483155:149646714964671497384918Acidovorax sp. JS42, complete genomehypothetical protein3e-27121
NC_010688:2781624:282152228215222822451930Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-26119
NC_010170:1498253:151987515198751520792918Bordetella petrii, complete genomehypothetical protein1e-26119
NC_002488:1638946:167774116777411678643903Xylella fastidiosa 9a5c, complete genomehypothetical protein1e-26119
NC_007484:667879:672358672358672786429Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein1e-26119
NC_010002:4544818:454881445488144549728915Delftia acidovorans SPH-1, complete genomehypothetical protein9e-27119
NC_010170:4533416:455858945585894559503915Bordetella petrii, complete genomehypothetical protein9e-27119
NC_008344:49039:106587106587107501915Nitrosomonas eutropha C91, complete genomehypothetical protein2e-26118
NC_013421:1780722:178949717894971790417921Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-26118
NC_009138:1974935:1996192199619219973461155Herminiimonas arsenicoxydans, complete genomehypothetical protein3e-26117
NC_012691:2614603:264193526419352642849915Tolumonas auensis DSM 9187, complete genomehypothetical protein1e-25115
NC_016845:4539381:454473945447394545191453Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein7e-25113
NC_008752:2936933:295800229580022958730729Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein2e-22105
NC_012779:305969:332394332394332858465Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-2099
NC_015567:313035:322003322003322470468Serratia sp. AS9 chromosome, complete genomehypothetical protein1e-2099
NC_015566:316340:321838321838322305468Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-2099
NC_009832:358291:367237367237367704468Serratia proteamaculans 568, complete genomehypothetical protein1e-2099
NC_010554:2872000:287301428730142873481468Proteus mirabilis HI4320, complete genomehypothetical protein3e-2097.8
NC_008702:2230396:223709622370962237575480Azoarcus sp. BH72, complete genomeconserved hypothetical protein4e-2097.4
NC_014029:331919:356718356718357185468Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-2097.1
NC_014228:3505320:352182335218233522287465Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein9e-2096.3
NC_013892:3278647:329439232943923294856465Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein9e-1992.8
NC_013892:1483000:150242115024211502885465Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein9e-1992.8
NC_014228:3391500:341726334172633417727465Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein9e-1992.8
NC_014306:4106569:412056641205664121009444Erwinia billingiae Eb661, complete genomehypothetical protein3e-1787.8
NC_004547:590844:602464602464602955492Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-1787.4
NC_018697:1343756:137530413753041375777474Cycloclasticus sp. P1 chromosome, complete genomehypothetical protein2e-1478.6
NC_015554:4648919:466874846687484669221474Alteromonas sp. SN2 chromosome, complete genomehypothetical protein4e-1270.9
NC_007086:2477040:251275025127502513025276Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein7e-1270.1
NC_012731:2261787:226844522684452268831387Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-0962.4