Pre_GI: BLASTP Hits

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Query: NC_009512:3251545:3274042 Pseudomonas putida F1, complete genome

Start: 3274042, End: 3275403, Length: 1362

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007973:1411714:1422721142272114241151395Ralstonia metallidurans CH34 chromosome 1, complete sequencemembrane protein involved in aromatic hydrocarbon degradation9e-95347
NC_008825:846916:8619128619128632851374Methylibium petroleiphilum PM1, complete genomelong-chain fatty acid transport like protein1e-94347
NC_009512:3282500:3291372329137232927541383Pseudomonas putida F1, complete genomemembrane protein involved in aromatic hydrocarbon degradation2e-89329
NC_016147:1825827:1844879184487918462551377Pseudoxanthomonas spadix BD-a59 chromosome, complete genomearomatic hydrocarbon degradation membrane protein2e-83310
NC_015554:4002952:400524640052464005980735Alteromonas sp. SN2 chromosome, complete genomearomatic hydrocarbon degradation membrane protein1e-43177
NC_012968:435532:4388424388424400921251Methylotenera mobilis JLW8, complete genomemembrane protein involved in aromatic hydrocarbon degradation9e-1995.1
NC_016830:5109953:5112359511235951136301272Pseudomonas fluorescens F113 chromosome, complete genomeLong-chain fatty acid transport protein2e-1273.9
NC_012108:4417483:4425021442502144263221302Desulfobacterium autotrophicum HRM2, complete genomeFadL4e-1273.2
NC_014733:1223359:1250968125096812522391272Methylovorus sp. MP688 chromosome, complete genomemembrane protein involved in aromatic hydrocarbon degradation4e-1169.7
NC_014041:661352:6649996649996662491251Zunongwangia profunda SM-A87 chromosome, complete genomeOMPP1/FadL/TodX family outer membrane protein transport protein6e-1169.3
NC_014758:310394:3460543460543473341281Calditerrivibrio nitroreducens DSM 19672 chromosome, completemembrane protein involved in aromatic hydrocarbon degradation3e-1067
NC_012440:609659:6258266258266271601335Persephonella marina EX-H1, complete genomemembrane protein involved in aromatic hydrocarbon degradation2e-0861.2
NC_014836:1551965:1557550155755015588901341Desulfurispirillum indicum S5 chromosome, complete genomemembrane protein involved in aromatic hydrocarbon degradation2e-0860.8
NC_014121:2247913:2253001225300122541881188Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative fatty acid transport system, membrane protein3e-0756.6
NC_016513:1720006:1730878173087817323081431Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeFadL protein3e-0653.5