Pre_GI: BLASTP Hits

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Query: NC_009512:2238437:2249291 Pseudomonas putida F1, complete genome

Start: 2249291, End: 2249830, Length: 540

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016609:2730449:273831027383102738840531Niastella koreensis GR20-10 chromosome, complete genomeDSBA oxidoreductase2e-36151
NC_010628:3675128:368693336869333687475543Nostoc punctiforme PCC 73102, complete genomeDSBA oxidoreductase2e-31135
NC_007412:147757:171716171716172306591Anabaena variabilis ATCC 29413 plasmid C, complete sequenceDSBA oxidoreductase4e-31134
NC_007412:110698:133799133799134356558Anabaena variabilis ATCC 29413 plasmid C, complete sequenceDSBA oxidoreductase2e-22105
NC_015656:2565417:2583823258382325857061884Frankia symbiont of Datisca glomerata chromosome, complete genomeNa(+)/H(+) antiporter nhaA2e-2098.6
NC_013132:705314:707697707697708236540Chitinophaga pinensis DSM 2588, complete genomehypothetical protein2e-2098.6
NC_003272:2560329:256910725691072569664558Nostoc sp. PCC 7120, complete genomehypothetical protein5e-2097.1
NC_014960:3410741:3431239343123934324411203Anaerolinea thermophila UNI-1, complete genomepeptidyl-prolyl cis-trans isomerase B4e-1994
NC_009380:1885024:1901057190105719030151959Salinispora tropica CNB-440 chromosome, complete genomeNa+/H+ antiporter NhaA3e-1891.3
NC_019771:1356000:136414613641461364697552Anabaena cylindrica PCC 7122, complete genomeDSBA oxidoreductase1e-1789.4
NC_014623:464324:470970470970471626657Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDSBA oxidoreductase family protein5e-1787.4
NC_009092:1874888:188535218853521886140789Shewanella loihica PV-4, complete genomeDSBA oxidoreductase1e-1685.9
NC_016614:822715:831168831168831941774Vibrio sp. EJY3 chromosome 2, complete sequencehypothetical protein4e-1684.3
NC_013849:466091:498097498097499047951Ferroglobus placidus DSM 10642 chromosome, complete genomeDSBA oxidoreductase2e-1582
NC_014623:8463363:8466539846653984685422004Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDSBA-like thioredoxin domain-containing protein3e-1581.3
NC_013960:1778411:1792517179251717943521836Nitrosococcus halophilus Nc4 chromosome, complete genomeNa+/H+ antiporter NhaA8e-1476.6
NC_009342:135500:155671155671156354684Corynebacterium glutamicum R chromosome, complete genomehypothetical protein6e-1373.6
NC_010617:263985:2816362816362834891854Kocuria rhizophila DC2201, complete genomeNa(+)/H(+) antiporter1e-1272.4
NC_009953:188000:202284202284202946663Salinispora arenicola CNS-205 chromosome, complete genomeDSBA oxidoreductase5e-1270.9
NC_012026:75812:911539115391971819Anaplasma marginale str. Florida, complete genomehypothetical protein2e-1168.6
NC_009338:2925286:295980629598062960465660Mycobacterium gilvum PYR-GCK chromosome, complete genomeDSBA oxidoreductase4e-1167.8
NC_008726:3915979:392119339211933921852660Mycobacterium vanbaalenii PYR-1, complete genomeDSBA oxidoreductase5e-1167
NC_015057:135585:1489501489501506611712Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequence9e-1166.2
NC_008705:1557711:160414616041461604829684Mycobacterium sp. KMS, complete genomeDSBA oxidoreductase1e-1066.2
NC_008146:1577604:159848915984891599430942Mycobacterium sp. MCS, complete genomeDSBA oxidoreductase2e-1065.5
NC_013441:2788806:280706128070612807705645Gordonia bronchialis DSM 43247, complete genomeDSBA oxidoreductase3e-1064.7
NC_013525:1871795:187179518717951872490696Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeDSBA oxidoreductase8e-1063.2
NC_013441:2842134:285189828518982852542645Gordonia bronchialis DSM 43247, complete genomeDSBA oxidoreductase2e-0962.4
NC_008536:1778500:178461117846111785567957Solibacter usitatus Ellin6076, complete genomeDSBA oxidoreductase2e-0962
NC_017208:516127:533285533285533935651Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeThiol-disulfide oxidoreductase BdbD1e-0859.3
NC_015957:3067919:309366630936663094181516Streptomyces violaceusniger Tu 4113 chromosome, complete genomeDSBA oxidoreductase3e-0858.2
NC_014171:521996:539489539489540139651Bacillus thuringiensis BMB171 chromosome, complete genomeThiol-disulfide oxidoreductase BdbD3e-0858.2
NC_007333:1743890:175499717549971755836840Thermobifida fusca YX, complete genomesimilar to Protein-disulfide isomerase5e-0857.4
NC_007354:1087456:108745610874561088175720Ehrlichia canis str. Jake, complete genomehypothetical protein6e-0857
NC_014972:2371647:2379569237956923807441176Desulfobulbus propionicus DSM 2032 chromosome, complete genomeVitamin K epoxide reductase3e-0754.7
NC_010170:1417615:142318814231881423943756Bordetella petrii, complete genomehypothetical protein4e-0754.3