Pre_GI: BLASTP Hits

Some Help

Query: NC_009512:2108686:2133774 Pseudomonas putida F1, complete genome

Start: 2133774, End: 2134568, Length: 795

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4790482:483338548333854834056672Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-128458
NC_013716:1618249:163585416358541636645792Citrobacter rodentium ICC168, complete genomehypothetical protein3e-79295
NC_007614:1633332:163616716361671636979813Nitrosospira multiformis ATCC 25196 chromosome 1, completeProtein of unknown function DUF12643e-48192
NC_007005:1636875:167769216776921678069378Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein6e-43174
NC_004578:5192110:521824752182475218624378Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein6e-43174
NC_017986:4790482:482335148233514823473123Pseudomonas putida ND6 chromosome, complete genomelipoprotein6e-1684.7
NC_017986:4790482:482306648230664823281216Pseudomonas putida ND6 chromosome, complete genomelipoprotein2e-0860.1