Pre_GI: BLASTP Hits

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Query: NC_009480:739395:742620 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 742620, End: 743141, Length: 522

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015125:788931:793902793902794312411Microbacterium testaceum StLB037, complete genomeputative translation initiation inhibitor, yjgF family3e-37154
NC_018681:2447871:245204224520422452449408Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein5e-37153
NC_015953:2512152:252655925265592527026468Streptomyces sp. SirexAA-E chromosome, complete genomeendoribonuclease L-PSP1e-30132
NC_016582:4983222:499979649997965000206411Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-30132
NC_018581:759932:766157766157766543387Gordonia sp. KTR9 chromosome, complete genomePutative translation initiation inhibitor, yjgF family3e-2097.8
NC_015588:2939747:294143929414392941846408Isoptericola variabilis 225 chromosome, complete genomeEndoribonuclease L-PSP4e-0960.8