Pre_GI: BLASTP Hits

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Query: NC_009480:31412:69085 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 69085, End: 69936, Length: 852

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009480:31412:527085270853559852Clavibacter michiganensis subsp. michiganensis NCPPB 382, completehypothetical protein3e-140497
NC_013093:2895511:290321729032172904017801Actinosynnema mirum DSM 43827, complete genomePectate lyase9e-35147
NC_013093:2895511:289551128955112896290780Actinosynnema mirum DSM 43827, complete genomePectate lyase3e-32139
NC_013093:4890557:4915343491534349166351293Actinosynnema mirum DSM 43827, complete genomePectate lyase2e-31136
NC_012034:1925983:1932088193208819334701383Anaerocellum thermophilum DSM 6725, complete genomePectate lyase2e-1686.3
NC_015949:1301004:1306701130670113080441344Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomePectate lyase7e-1684.7
NC_014392:1769803:1773638177363817749691332Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomePectate lyase1e-1583.6
NC_007912:2930063:2932444293244429339791536Saccharophagus degradans 2-40, complete genomehypothetical protein2e-0756.6
NC_007912:3828980:3835207383520738364811275Saccharophagus degradans 2-40, complete genomeN-acetylglucosamine-6-phosphate deacetylase2e-0756.6