Pre_GI: BLASTP Hits

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Query: NC_009480:31412:40054 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 40054, End: 40860, Length: 807

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009664:4423829:445632644563264457084759Kineococcus radiotolerans SRS30216, complete genomeXylose isomerase domain protein TIM barrel3e-83308
NC_014732:141000:159300159300160025726Halogeometricum borinquense DSM 11551 plasmid pHBOR04, completesugar phosphate isomerase/epimerase6e-1168.2
NC_014391:3445672:344920934492093450150942Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeXylose isomerase domain-containing protein TIM barrel1e-1067
NC_009523:5522447:552244755224475523199753Roseiflexus sp. RS-1 chromosome, complete genomexylose isomerase domain-containing protein2e-1066.6
NC_010572:1081236:110165511016551102539885Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein4e-1065.5
NC_018750:6950695:6966215696621569672761062Streptomyces venezuelae ATCC 10712, complete genomeXylose isomerase domain protein TIM barrel2e-0963.2
NC_013730:3208571:321303832130383213889852Spirosoma linguale DSM 74, complete genomeXylose isomerase domain protein TIM barrel4e-0962
NC_014500:3519722:351972235197223520576855Dickeya dadantii 3937 chromosome, complete genomeSugar phosphate isomerase/epimerase5e-0961.6
NC_010572:1293786:1301886130188613029681083Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-0757
NC_012914:970000:989972989972990841870Paenibacillus sp. JDR-2, complete genomeXylose isomerase domain protein TIM barrel6e-0754.7
NC_015947:1142206:116136911613691162232864Burkholderia sp. JV3 chromosome, complete genomexylose isomerase domain-containing protein8e-0754.3
NC_013171:1731491:173537017353701736224855Anaerococcus prevotii DSM 20548, complete genomeXylose isomerase domain protein TIM barrel2e-0653.1
NC_021177:7159654:7172383717238371734591077Streptomyces fulvissimus DSM 40593, complete genomeXylose isomerase domain-containing protein TIM barrel2e-0652.8
NC_011071:1178423:119794711979471198810864Stenotrophomonas maltophilia R551-3, complete genomeXylose isomerase domain protein TIM barrel6e-0651.6