Pre_GI: BLASTP Hits

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Query: NC_009480:2932108:2943609 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 2943609, End: 2944577, Length: 969

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010407:316320:323961323961324929969Clavibacter michiganensis subsp. sepedonicus chromosome, completehypothetical protein4e-172603
NC_006361:3615322:3631766363176636328451080Nocardia farcinica IFM 10152, complete genomehypothetical protein2e-67256
NC_009338:2042664:2046203204620320472251023Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein3e-61235
NC_007947:577315:5807165807165818281113Methylobacillus flagellatus KT, complete genomeDNA topoisomerase, type I, putative6e-58224
NC_012856:3615550:3620283362028336214611179Ralstonia pickettii 12D chromosome 1, complete genomeDNA topoisomerase3e-53208
NC_020209:1847895:1869823186982318708391017Pseudomonas poae RE*1-1-14, complete genomeDNA topoisomerase5e-52205
NC_007492:3384077:3385914338591433869511038Pseudomonas fluorescens PfO-1, complete genomeDNA topoisomerase, type I, putative1e-49196
NC_015703:3637312:3657653365765336587591107Runella slithyformis DSM 19594 chromosome, complete genomeDNA topoisomerase2e-46186
NC_009668:1726000:1739489173948917406011113Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein2e-42173
NC_014958:1268559:1283393128339312844151023Deinococcus maricopensis DSM 21211 chromosome, complete genomeDNA topoisomerase9e-41167
NC_006677:1503513:150455015045501505278729Gluconobacter oxydans 621H, complete genomeDNA topoisomerase I1e-37157
NC_012587:3177583:3192008319200831931831176Rhizobium sp. NGR234, complete genomeputative DNA topoisomerase I protein2e-36152