Pre_GI: BLASTP Hits

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Query: NC_009457:351512:397351 Vibrio cholerae O395 chromosome 2, complete sequence

Start: 397351, End: 401682, Length: 4332

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004459:767127:7671277671277716444518Vibrio vulnificus CMCP6 chromosome I, complete sequencehypothetical protein01999
NC_014965:2954876:2954876295487629594294554Vibrio vulnificus MO6-24/O chromosome I, complete sequenceaccessory colonization factor AcfD01986
NC_004605:1385444:1444991144499114494844494Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein01820
NC_011751:3530954:3564272356427235688344563Escherichia coli UMN026 chromosome, complete genomeinner membrane lipoprotein01366
NC_011750:3584000:3612166361216636167404575Escherichia coli IAI39 chromosome, complete genomeinner membrane lipoprotein01348
AP010958:3669500:3718858371885837211252268Escherichia coli O103:H2 str. 12009 DNA, complete genome0776
NC_013353:3669500:3718858371885837211252268Escherichia coli O103:H2 str. 12009, complete genome0776
NC_013353:3669500:3716393371639337175231131Escherichia coli O103:H2 str. 12009, complete genome2e-108394
AP010958:3669500:3716393371639337175231131Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-108394
NC_013353:3669500:3722484372248437235811098Escherichia coli O103:H2 str. 12009, complete genome5e-42174
AP010958:3669500:3722484372248437235811098Escherichia coli O103:H2 str. 12009 DNA, complete genome5e-42174