Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:574437:587708 Pseudomonas mendocina ymp, complete genome

Start: 587708, End: 589309, Length: 1602

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:617020:6299326299326315511620Pseudomonas mendocina NK-01 chromosome, complete genomesporulation domain-containing protein2e-154546
NC_015740:636667:6508356508356524241590Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype II secretory pathway ATPase ExeA8e-89328
NC_009434:608765:6240216240216255921572Pseudomonas stutzeri A1501, complete genometype II secretory pathway ATPase ExeA9e-89328
NC_007912:3403101:3407909340790934093931485Saccharophagus degradans 2-40, complete genomeTriosephosphate isomerase4e-0653.5