Pre_GI: BLASTP Hits

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Query: NC_009439:4661102:4668472 Pseudomonas mendocina ymp, complete genome

Start: 4668472, End: 4669200, Length: 729

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009937:1733196:174333517433351744063729Azorhizobium caulinodans ORS 571, complete genomeconserved hypothetical protein2e-24112
NC_009720:1248866:127102312710231271463441Xanthobacter autotrophicus Py2, complete genomehypothetical protein6e-1271.2
NC_007761:241900:249731249731250375645Rhizobium etli CFN 42, complete genomehypothetical protein8e-1270.9
NC_020409:584000:588885588885589343459Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein2e-1066.2
NC_011769:3434744:344991734499173450681765Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeParB domain protein nuclease2e-0652.8