Pre_GI: BLASTP Hits

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Query: NC_009439:4404942:4415749 Pseudomonas mendocina ymp, complete genome

Start: 4415749, End: 4416729, Length: 981

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:5056901:5062220506222050632421023Methylobacterium nodulans ORS 2060, complete genomehypothetical protein6e-47187
NC_002695:1929215:193610819361081937097990Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein8e-36150
NC_002655:2142587:215006521500652151057993Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933R9e-36150
NC_011894:7109374:712176271217627122706945Methylobacterium nodulans ORS 2060, complete genomehypothetical protein5e-1995.1
NC_014100:449541:459836459836460783948Caulobacter segnis ATCC 21756 chromosome, complete genomehypothetical protein4e-1789
NC_011894:3988500:399732739973273998301975Methylobacterium nodulans ORS 2060, complete genomehypothetical protein5e-1788.6
NC_015947:223184:232314232314233273960Burkholderia sp. JV3 chromosome, complete genomehypothetical protein2e-1686.7
NC_007964:2762000:276757427675742768524951Nitrobacter hamburgensis X14, complete genomehypothetical protein5e-1685.5
NC_010322:583842:598260598260599159900Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein6e-1168.6