Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:3394174:3394992 Pseudomonas mendocina ymp, complete genome

Start: 3394992, End: 3395363, Length: 372

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:4280401:428122242812224281605384Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein9e-38155
NC_008463:4389721:439054243905424390925384Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein9e-38155
NC_002516:1236644:125808712580871258470384Pseudomonas aeruginosa PAO1, complete genomehypothetical protein9e-38155
NC_007645:5397526:540460954046095405004396Hahella chejuensis KCTC 2396, complete genomehypothetical protein6e-1062.8