Pre_GI: BLASTP Hits

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Query: NC_009439:2337024:2359957 Pseudomonas mendocina ymp, complete genome

Start: 2359957, End: 2361342, Length: 1386

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015740:2614317:2615205261520526165541350Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completephospho-2-dehydro-3-deoxyheptonate aldolase, class II0831
NC_015276:2769000:2770536277053627718821347Marinomonas mediterranea MMB-1 chromosome, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase0669
NC_009654:2940278:2941082294108229424281347Marinomonas sp. MWYL1, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase0666
NC_007643:791500:8064358064358078201386Rhodospirillum rubrum ATCC 11170, complete genome3-deoxy-7-phosphoheptulonate synthase0666
NC_007482:607365:6300716300716314261356Pseudoalteromonas haloplanktis TAC125 chromosome II, completePhospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate 2e-179629
NC_008343:1548020:1577712157771215792141503Granulibacter bethesdensis CGDNIH1, complete genome3-deoxy-7-phosphoheptulonate synthase5e-172604
NC_014414:167803:1844531844531858291377Parvularcula bermudensis HTCC2503 chromosome, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase, class II6e-166584
NC_012108:1067876:1095238109523810965841347Desulfobacterium autotrophicum HRM2, complete genomeAroH9e-151533
NC_019907:819165:8191658191658205261362Liberibacter crescens BT-1 chromosome, complete genome2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase II3e-150531
NC_013510:3065000:3082342308234230836911350Thermomonospora curvata DSM 43183, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase3e-143508
NC_007511:1780500:1784393178439317858021410Burkholderia sp. 383 chromosome 2, complete sequence3-deoxy-7-phosphoheptulonate synthase7e-129461
NC_016799:1667338:1687965168796516893531389Corynebacterium diphtheriae 31A chromosome, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase8e-119427
NC_016787:1605536:1626161162616116275491389Corynebacterium diphtheriae HC03 chromosome, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase8e-119427
NC_016790:1581411:1602035160203516034231389Corynebacterium diphtheriae VA01 chromosome, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase1e-118427
NC_016788:1609011:1629636162963616310241389Corynebacterium diphtheriae HC04 chromosome, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase1e-118427
NC_016783:1636820:1657448165744816588361389Corynebacterium diphtheriae INCA 402 chromosome, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase2e-118426
NC_016800:1639373:1659998165999816613861389Corynebacterium diphtheriae BH8 chromosome, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase3e-118426
NC_016785:1586546:1607180160718016085681389Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase3e-118426
NC_009142:6199326:6245659624565962469001242Saccharopolyspora erythraea NRRL 2338, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase3e-104379