Pre_GI: BLASTP Hits

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Query: NC_009439:2337024:2357417 Pseudomonas mendocina ymp, complete genome

Start: 2357417, End: 2358610, Length: 1194

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:2838132:2838518283851828397111194Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein0677
NC_013947:2351208:2367785236778523690081224Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein3e-74279
NC_009078:862796:8866038866038878531251Burkholderia pseudomallei 1106a chromosome II, complete sequencehypothetical protein2e-54213
NC_009079:1492664:1494541149454114957701230Burkholderia mallei NCTC 10247 chromosome I, complete sequencehypothetical protein2e-54213
NC_009075:937782:9607019607019620351335Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein3e-54213
NC_007435:2701242:2724961272496127262951335Burkholderia pseudomallei 1710b chromosome II, complete sequencehypothetical protein3e-54213
NC_006351:881655:9054549054549066831230Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein3e-54212
NC_009767:2734166:2751333275133327525531221Roseiflexus castenholzii DSM 13941, complete genomeprotein of unknown function DUF10066e-46185
NC_003911:3864852:3893745389374538949591215Silicibacter pomeroyi DSS-3, complete genomehypothetical protein1e-45184
NC_015275:566000:5879595879595891491191Clostridium lentocellum DSM 5427 chromosome, complete genomeprotein of unknown function DUF10064e-25115
NC_016935:1365463:1435934143593414371271194Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein9e-23108
NC_015690:3941113:4016469401646940177281260Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein4e-22106
NC_014623:2283253:2289114228911422903311218Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein4e-1582.8
NC_002677:1822500:183139318313931831674282Mycobacterium leprae TN, complete genomehypothetical protein1e-0964.7
NC_015563:4911188:4932477493247749335741098Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein3e-0757