Pre_GI: BLASTP Hits

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Query: NC_009439:2337024:2355985 Pseudomonas mendocina ymp, complete genome

Start: 2355985, End: 2356929, Length: 945

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:2838132:284019928401992841143945Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein1e-118426
NC_004129:1741816:176617317661731767102930Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-84311
NC_009512:1518113:155092315509231551849927Pseudomonas putida F1, complete genomeprotein of unknown function DUF6, transmembrane2e-81302
NC_015856:4975815:499021449902144991116903Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein2e-50199
NC_016628:1190366:120649312064931207446954Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein7e-45181
NC_014973:4503054:450856245085624509521960Geobacter sp. M18 chromosome, complete genomehypothetical protein1e-44180
NC_017195:2027430:203142320314232032301879Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYoaV3e-1169.3
NC_014976:170683:170683170683171561879Bacillus subtilis BSn5 chromosome, complete genomecysteine and O-acetyl serine efflux permease5e-1168.6
NC_014479:2038348:204106020410602041938879Bacillus subtilis subsp. spizizenii str. W23 chromosome, completecysteine and O-acetyl serine efflux permease2e-1066.6
NC_016047:2150000:215285621528562153734879Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein5e-1065.5
NC_020244:2049753:205171920517192052534816Bacillus subtilis XF-1, complete genomecysteine and O-acetyl serine efflux permease1e-0861.2
NC_013510:5394432:543079854307985431700903Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF6 transmembrane6e-0755.1
NC_018645:13408:150301503015932903Desulfobacula toluolica Tol2, complete genomehypothetical protein5e-0652