Pre_GI: BLASTP Hits

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Query: NC_009439:1297851:1330113 Pseudomonas mendocina ymp, complete genome

Start: 1330113, End: 1330457, Length: 345

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005139:796546:809941809941810360420Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-1063.5
NC_005139:2201820:227548722754872275822336Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein6e-1062.8
NC_010322:5349000:536903653690365369392357Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein1e-0755.5
NC_007946:4779745:478635947863594786727369Escherichia coli UTI89, complete genomehypothetical protein1e-0652
NC_008253:4735418:474338847433884743756369Escherichia coli 536, complete genomehypothetical protein1e-0652