Pre_GI: BLASTP Hits

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Query: NC_009438:3019552:3023012 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 3023012, End: 3023644, Length: 633

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009997:3661083:367198936719893672621633Shewanella baltica OS195, complete genomehypothetical protein4e-104377
NC_010334:1701957:171841917184191719048630Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein2e-58225
NC_009092:1504363:154966615496661550292627Shewanella loihica PV-4, complete genomehypothetical protein2e-48191
NC_008700:2788363:278836327883632788995633Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein7e-43173
NC_014541:2978500:298261229826122983250639Ferrimonas balearica DSM 9799 chromosome, complete genomelipoprotein, putative3e-31135
NC_008570:1143578:118838911883891189123735Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein3e-1478.6