Pre_GI: BLASTP Hits

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Query: NC_009381:2009842:2017280 Yersinia pestis Pestoides F chromosome, complete genome

Start: 2017280, End: 2017537, Length: 258

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1715035:172883017288301729096267Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,7e-44175
NC_010159:2955562:296359729635972963854258Yersinia pestis Angola, complete genome7e-44175
NC_013592:1668092:169563416956341695984351Dickeya dadantii Ech586, complete genomeflagellar transcriptional activator5e-35145
NC_012917:2971702:298162329816232981973351Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeflagellar transcriptional activator1e-34144
NC_012880:1765920:179172917917291792079351Dickeya dadantii Ech703, complete genomeflagellar transcriptional activator1e-34144
NC_014500:3071764:308981930898193090169351Dickeya dadantii 3937 chromosome, complete genomeflagellar transcriptional activator flhD2e-34144
NC_013421:2004088:201459920145992014949351Pectobacterium wasabiae WPP163, complete genomeflagellar transcriptional activator2e-34144
NC_004547:1873390:193436119343611934720360Erwinia carotovora subsp. atroseptica SCRI1043, complete genometranscriptional activator FlhD5e-34142
NC_015566:3269469:327110132711013271451351Serratia sp. AS12 chromosome, complete genometranscriptional activator FlhD1e-33141
NC_015061:1902251:193306819330681933412345Rahnella sp. Y9602 chromosome, complete genomeflagellar transcriptional activator1e-31134
NC_010694:1052722:106264810626481062998351Erwinia tasmaniensis, complete genomeFlagellar transcriptional activator5e-1579.7
NC_004344:26828:379813798138325345Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,transcriptional activator FlhD9e-1579
NC_007973:1821753:183124818312481831565318Ralstonia metallidurans CH34 chromosome 1, complete sequenceflagellar transcriptional activator1e-1375.5
NC_010682:1593108:160674116067411607085345Ralstonia pickettii 12J chromosome 1, complete sequenceflagellar transcriptional activator1e-0651.6