Pre_GI: BLASTP Hits

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Query: NC_009380:3903392:3907354 Salinispora tropica CNB-440 chromosome, complete genome

Start: 3907354, End: 3908001, Length: 648

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014815:3790050:379301037930103793594585Micromonospora sp. L5 chromosome, complete genomehelix-turn-helix domain protein3e-65248
NC_015434:3507059:352202535220253522603579Verrucosispora maris AB-18-032 chromosome, complete genomeXRE family transcriptional regulator3e-54211
NC_013235:464049:465497465497466090594Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, XRE family6e-51200
NC_018524:301992:319448319448320035588Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehelix-turn-helix family protein2e-46185
NC_013729:2258582:225858222585822259178597Kribbella flavida DSM 17836, complete genometranscriptional regulator, XRE family3e-42171
NC_008595:2215244:221785622178562218425570Mycobacterium avium 104, complete genomeregulatory protein6e-30130
NC_013521:345308:370775370775371347573Sanguibacter keddieii DSM 10542, complete genomepredicted transcriptional regulator8e-21100
NC_014118:2417838:242979424297942430366573Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, XRE family4e-1065.1
NC_008148:2498000:252032625203262520988663Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, XRE family with cupin sensor1e-0860.1
NC_014640:5047201:504847650484765049030555Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein3e-0755.5
NC_015723:2116090:211951321195132120103591Cupriavidus necator N-1 chromosome 2, complete sequenceN-carbamoyl-L-amino acid hydrolase AmaB4e-0754.7
NC_017223:3345902:334953933495393350378840Bordetella pertussis CS chromosome, complete genomeMerR family transcriptional regulator2e-0652.4
NC_002929:3305682:330931933093193310158840Bordetella pertussis Tohama I, complete genomeprobable MerR-family transcriptional regulator2e-0652.4
NC_012808:2886282:289424728942472894843597Methylobacterium extorquens AM1, complete genomeputative transcriptional regulator, XRE family6e-0650.8