Pre_GI: BLASTP Hits

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Query: NC_009092:4585784:4601753 Shewanella loihica PV-4, complete genome

Start: 4601753, End: 4602115, Length: 363

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020260:3931567:393605139360513936410360Cronobacter sakazakii Sp291, complete genomeribonuclease P6e-32135
NC_004337:3590323:386790738679073868266360Shigella flexneri 2a str. 301, complete genomeribonuclease P7e-32135
NC_015968:4790239:481217448121744812533360Enterobacter asburiae LF7a chromosome, complete genomeribonuclease P protein component8e-32135
NC_010322:1:44408405Pseudomonas putida GB-1 chromosome, complete genomeribonuclease P3e-26117
NC_002947:8394:839483948798405Pseudomonas putida KT2440, complete genomeribonuclease P7e-26115
NC_021150:5298500:532217753221775322569393Azotobacter vinelandii CA6, complete genomeribonuclease P1e-24111
NC_012560:5338707:536428553642855364677393Azotobacter vinelandii DJ, complete genomeBacterial ribonuclease P protein1e-24111
NC_002516:6255854:626380562638056264212408Pseudomonas aeruginosa PAO1, complete genomeribonuclease P2e-23107
NC_007292:1:142951429514654360Candidatus Blochmannia pennsylvanicus str. BPEN, complete genomeRNase P, protein component2e-1684.7
NC_014315:3319865:332789633278963328255360Nitrosococcus watsoni C-113 chromosome, complete genomeribonuclease P protein component2e-1581.3
NC_019940:1:225225617393Thioflavicoccus mobilis 8321 chromosome, complete genomeribonuclease P protein component2e-1374.3
NC_004757:427483:444329444329444688360Nitrosomonas europaea ATCC 19718, complete genomeBacterial ribonuclease P protein2e-1270.9
NC_008576:4701930:471869447186944719086393Magnetococcus sp. MC-1, complete genomeribonuclease P protein component3e-0960.5
NC_020299:764526:809325809325809723399Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeribonuclease P protein component3e-0753.9
NC_002488:2657274:267861926786192679047429Xylella fastidiosa 9a5c, complete genomeribonuclease P8e-0649.3