Pre_GI: BLASTP Hits

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Query: NC_009092:3682413:3690445 Shewanella loihica PV-4, complete genome

Start: 3690445, End: 3691314, Length: 870

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015723:961909:961909961909962775867Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein4e-46184
NC_004578:4781326:480547748054774806364888Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-44178
NC_018868:2458122:247719724771972478045849Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomepermease of the drug/metabolite transporter superfamily protein1e-40166
NC_015276:1426000:144428914442891445230942Marinomonas mediterranea MMB-1 chromosome, complete genomeprotein of unknown function DUF6 transmembrane6e-40164
NC_012968:63898:723427234273190849Methylotenera mobilis JLW8, complete genomeprotein of unknown function DUF6 transmembrane6e-40164
NC_020063:3352516:337424333742433375082840Enterobacteriaceae bacterium strain FGI 57, complete genomeputative permease, DMT superfamily1e-33143
NC_008712:215499:218501218501219448948Arthrobacter aurescens TC1 plasmid TC1, complete sequenceputative Integral membrane protein DUF69e-30130
NC_010557:679656:730892730892731800909Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceprotein of unknown function DUF6 transmembrane5e-1995.1
NC_008392:1029134:106985410698541070681828Burkholderia cepacia AMMD chromosome 3, complete sequenceprotein of unknown function DUF6, transmembrane3e-1789.4