Pre_GI: BLASTP Hits

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Query: NC_009092:3239500:3250922 Shewanella loihica PV-4, complete genome

Start: 3250922, End: 3251872, Length: 951

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008321:3232000:323212132321213233065945Shewanella sp. MR-4, complete genomeporin, Gram-negative type2e-127455
NC_017506:93494:103339103339104310972Marinobacter adhaerens HP15 chromosome, complete genomeouter membrane porin1e-35150
NC_014541:2510819:2530289253028925313051017Ferrimonas balearica DSM 9799 chromosome, complete genomeporin Gram-negative type5e-32138
NC_014541:1996811:2020183202018320212411059Ferrimonas balearica DSM 9799 chromosome, complete genomeporin Gram-negative type6e-30131
NC_010334:835500:8355348355348365951062Shewanella halifaxensis HAW-EB4, complete genomeporin Gram-negative type3e-23109
NC_008321:3189974:3198316319831631993591044Shewanella sp. MR-4, complete genomeporin, Gram-negative type1e-22107
NC_011901:2914000:2925347292534729263661020Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeporin2e-1686.3
NC_016616:134449:1705971705971716821086Dechlorosoma suillum PS chromosome, complete genomeouter membrane protein (porin)2e-1273.6
NC_007645:1033834:104325110432511044198948Hahella chejuensis KCTC 2396, complete genomeOuter membrane protein (porin)9e-1064.7
NC_010515:1205258:1213385121338512144191035Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceporin Gram-negative type4e-0962.4
NC_011001:302500:3205503205503215841035Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative porin2e-0860.1
NC_011662:1160887:1182134118213411832461113Thauera sp. MZ1T, complete genomeporin Gram-negative type1e-0757.4
NC_012559:978419:9921059921059932291125Laribacter hongkongensis HLHK9, complete genomeProbable outer membrane porin6e-0755.1
NC_009659:543000:5563015563015573951095Janthinobacterium sp. Marseille chromosome, complete genomeporin6e-0755.1
NC_011662:1160887:1166632116663211677501119Thauera sp. MZ1T, complete genomeporin Gram-negative type2e-0653.5
NC_008314:2744553:2779044277904427801711128Ralstonia eutropha H16 chromosome 2, complete sequenceouter membrane protein (porin)3e-0652.8
NC_008314:2744553:2770865277086527720401176Ralstonia eutropha H16 chromosome 2, complete sequenceouter membrane porin protein precursor4e-0652.8
NC_010625:1415500:1433564143356414347841221Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceporin Gram-negative type9e-0651.2