Pre_GI: BLASTP Hits

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Query: NC_009092:2902171:2919819 Shewanella loihica PV-4, complete genome

Start: 2919819, End: 2922206, Length: 2388

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014012:3356629:3366851336685133692862436Shewanella violacea DSS12, complete genomeDNA polymerase II0965
NC_008577:3125675:3136302313630231387342433Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA polymerase B region0964
NC_008321:2922000:2935779293577929382112433Shewanella sp. MR-4, complete genomeDNA polymerase B region0957
NC_008322:2983951:2996462299646229988942433Shewanella sp. MR-7, complete genomeDNA polymerase B region0954
NC_011663:3181579:3197976319797632004052430Shewanella baltica OS223 chromosome, complete genomeDNA polymerase II0932
NC_009052:1899954:1902147190214719045762430Shewanella baltica OS155, complete genomeDNA polymerase B region0932
NC_014541:1280835:1283070128307012853852316Ferrimonas balearica DSM 9799 chromosome, complete genomeDNA damage-inducible DNA polymerase II0671
NC_007005:2686551:2737422273742227397852364Pseudomonas syringae pv. syringae B728a, complete genomeDNA polymerase II3e-178625
NC_007511:3371319:3387717338771733900982382Burkholderia sp. 383 chromosome 2, complete sequenceDNA polymerase B1e-176620
NC_011001:163813:1658901658901682742385Burkholderia cenocepacia J2315 chromosome 2, complete sequenceDNA polymerase II8e-175614
NC_015733:2194676:2213925221392522162852361Pseudomonas putida S16 chromosome, complete genomeDNA polymerase II4e-171602
NC_015740:2966184:2966964296696429693572394Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeDNA polymerase II4e-168592
NC_012912:647369:6523436523436547152373Dickeya zeae Ech1591, complete genomeDNA-directed DNA polymerase7e-168591
NC_008786:4579490:460111146011114601923813Verminephrobacter eiseniae EF01-2, complete genomeDNA polymerase II3e-68260
NC_016070:1657500:1669090166909016714472358Thermoproteus tenax Kra 1, complete genomeDNA polymerase II4e-38160
NC_010525:1177154:1179620117962011819742355Thermoproteus neutrophilus V24Sta, complete genomeDNA polymerase Pol22e-36155
NC_007796:1291671:1305745130574513082012457Methanospirillum hungatei JF-1, complete genomeDNA polymerase B region5e-36153
NC_003413:214120:2286062286062309332328Pyrococcus furiosus DSM 3638, complete genomeDNA-directed DNA polymerase2e-35151
NC_015315:1347982:1364685136468513670422358Thermoproteus uzoniensis 768-20 chromosome, complete genomeDNA polymerase II3e-35150
NC_015474:723553:7800557800557823822328Pyrococcus sp. NA2 chromosome, complete genomeDNA polymerase I1e-33145
NC_003106:2060628:2079541207954120818862346Sulfolobus tokodaii str. 7, complete genomeDNA polymerase II2e-33144
NC_013158:363222:3632223632223672834062Halorhabdus utahensis DSM 12940, complete genomeDNA polymerase B region5e-32140
NC_015518:614806:6323696323696347112343Acidianus hospitalis W1 chromosome, complete genomeDNA polymerase B exonuclease2e-31137
NC_011296:1299388:1305339130533913076782340Thermodesulfovibrio yellowstonii DSM 11347, complete genomeDNA polymerase2e-30134
NC_015416:1679188:1710631171063117133062676Methanosaeta concilii GP-6 chromosome, complete genomeDNA polymerase 25e-27123
NC_015320:1342105:1365379136537913677392361Archaeoglobus veneficus SNP6 chromosome, complete genomeDNA polymerase Pol21e-26122
NC_015435:120334:1180171180171203472331Metallosphaera cuprina Ar-4 chromosome, complete genomeDNA polymerase II6e-24113
NC_014002:1946664:1964962196496219677182757Methanohalophilus mahii DSM 5219 chromosome, complete genomereplicative DNA polymerase I2e-22108
NC_009776:617532:6211846211846239282745Ignicoccus hospitalis KIN4/I, complete genomereplicative DNA polymerase I6e-21103
NC_015574:2322811:2322811232281123246011791Methanobacterium sp. SWAN-1 chromosome, complete genomeDNA polymerase B region5e-21103
NC_007181:55685:5568555685580332349Sulfolobus acidocaldarius DSM 639, complete genomeDNA polymerase II7e-2099.8
NC_014408:1455851:1458941145894114607101770Methanothermobacter marburgensis str. Marburg chromosome, completeDNA polymerase5e-1997.1
NC_008698:235688:2641172641172666242508Thermofilum pendens Hrk 5, complete genomeDNA polymerase B region2e-1894.7
NC_019942:68031:8297182971847191749Aciduliprofundum sp. MAR08-339, complete genomeDNA polymerase elongation subunit (family B)3e-1894.4
NC_008818:1244612:1277856127785612806722817Hyperthermus butylicus DSM 5456, complete genomeDNA polymerase I5e-1893.6
NC_007181:1295956:1311882131188213145122631Sulfolobus acidocaldarius DSM 639, complete genomeDNA polymerase II2e-1792
NC_015518:1052701:1073148107314810758052658Acidianus hospitalis W1 chromosome, complete genomeDNA polymerase B18e-1789.7
NC_012622:1421098:1441645144164514442962652Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeDNA polymerase I4e-1584.3
NC_017275:1486526:1507070150707015097212652Sulfolobus islandicus HVE10/4 chromosome, complete genomeDNA polymerase B region4e-1584.3
NC_013769:1528196:1548744154874415513952652Sulfolobus islandicus L.D.8.5 chromosome, complete genomeDNA polymerase B region4e-1584.3
NC_012589:1531725:1552272155227215549232652Sulfolobus islandicus L.S.2.15, complete genomeDNA polymerase B region4e-1584.3
NC_012588:1443753:1464299146429914669502652Sulfolobus islandicus M.14.25 chromosome, complete genomeDNA polymerase I4e-1584
NC_012632:1568170:1588716158871615913672652Sulfolobus islandicus M.16.27 chromosome, complete genomeDNA polymerase I4e-1584
NC_012726:1431745:1452291145229114549422652Sulfolobus islandicus M.16.4 chromosome, complete genomeDNA polymerase I4e-1584
NC_017276:1335474:1356020135602013586712652Sulfolobus islandicus REY15A chromosome, complete genomeDNA polymerase B region4e-1584
NC_016645:343946:3637453637453663122568Pyrobaculum sp. 1860 chromosome, complete genomeDNA polymerase I5e-1480.5
NC_003364:1282000:1286960128696012895272568Pyrobaculum aerophilum str. IM2, complete genomeDNA polymerase II7e-1479.7
NC_006396:1626472:1630208163020816343744167Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceDNA polymerase B elongation subunit1e-1379.3
NC_005213:63752:6178661786638162031Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein1e-1379
NC_014623:464324:4858024858024882102409Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDNA polymerase1e-1276.3
NC_012028:514000:5235745235745257242151Halorubrum lacusprofundi ATCC 49239 chromosome 2, complete genomeDNA polymerase B region1e-1275.9
NC_002608:268000:2890842890842912522169Halobacterium sp. NRC-1 plasmid pNRC200, complete sequenceDNA polymerase B23e-1274.3
NC_019964:2816990:2854332285433228564342103Halovivax ruber XH-70, complete genomeDNA polymerase elongation subunit (family B)3e-1171.2
NC_017954:345430:3843493843493869372589Thermogladius cellulolyticus 1633 chromosome, complete genomeDNA polymerase I3e-1170.9
NC_014160:1239811:1241512124151212440942583Thermosphaera aggregans DSM 11486 chromosome, complete genomereplicative DNA polymerase I1e-1068.9
NC_014961:1257414:1259477125947712620742598Desulfurococcus mucosus DSM 2162 chromosome, complete genomereplicative DNA polymerase I3e-1067.8
NC_008786:4579490:460183646018364602471636Verminephrobacter eiseniae EF01-2, complete genomeDNA polymerase II7e-0963.2