Pre_GI: BLASTP Hits

Some Help

Query: NC_009092:2529518:2548610 Shewanella loihica PV-4, complete genome

Start: 2548610, End: 2549545, Length: 936

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006512:1942000:196151719615171962386870Idiomarina loihiensis L2TR, complete genomeAlpha/beta superfamily hydrolase5e-25115
NC_015410:2505168:252082025208202521683864Pseudomonas mendocina NK-01 chromosome, complete genomealpha/beta hydrolase fold protein4e-22105
NC_017271:149856:170819170819171670852Xanthomonas campestris pv. raphani 756C chromosome, completehydrolase4e-21102
NC_007963:2777066:277706627770662777935870Chromohalobacter salexigens DSM 3043, complete genomealpha/beta hydrolase2e-1996.3
NC_012559:1228280:123433512343351235252918Laribacter hongkongensis HLHK9, complete genomeProbable hydrolase3e-1169.3
NC_015656:4879904:488994048899404890842903Frankia symbiont of Datisca glomerata chromosome, complete genomealpha/beta hydrolase fold protein9e-0754.7
NC_013440:1044100:1044100104410010532379138Haliangium ochraceum DSM 14365, complete genomeKR domain protein2e-0653.1