Pre_GI: BLASTP Hits

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Query: NC_009092:1989977:2006591 Shewanella loihica PV-4, complete genome

Start: 2006591, End: 2006941, Length: 351

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010334:2749250:275488027548802755227348Shewanella halifaxensis HAW-EB4, complete genomehydrogenase expression/synthesis HypA6e-27119
NC_009901:2427291:244896224489622449309348Shewanella pealeana ATCC 700345, complete genomehydrogenase expression/synthesis HypA3e-26117
NC_007575:1484305:148855614885561488897342Sulfurimonas denitrificans DSM 1251, complete genomehydrogenase expression/synthesis, HypA8e-23105
NC_017192:1841987:185059018505901850931342Arcobacter sp. L, complete genomehydrogenase expression/formation protein HypA2e-1684.3
NC_015557:30622:434794347943823345Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase nickel insertion protein HypA7e-1579.3
NC_020411:28995:435134351343857345Hydrogenobaculum sp. HO, complete genomeHydrogenase-3 nickel incorporation protein HypA7e-1579.3
NC_015587:28997:435154351543859345Hydrogenobaculum sp. SHO chromosome, complete genomehydrogenase nickel incorporation protein hypA7e-1579.3
NC_012115:961883:972129972129972464336Nautilia profundicola AmH, complete genomehydrogenase expression/synthesis, HypA3e-1270.5
NC_019940:2834850:283683228368322837185354Thioflavicoccus mobilis 8321 chromosome, complete genomehydrogenase nickel incorporation protein HypA2e-1167.4
NC_007760:535825:558933558933559277345Anaeromyxobacter dehalogenans 2CP-C, complete genomeHydrogenase expression/synthesis, HypA1e-1065.5
NC_018515:937994:952434952434952775342Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehydrogenase nickel incorporation protein HypA1e-0961.6
NC_021182:1983456:199383119938311994172342Clostridium pasteurianum BC1, complete genomehydrogenase nickel insertion protein HypA4e-0753.5
NC_021182:1761789:177248317724831772824342Clostridium pasteurianum BC1, complete genomehydrogenase nickel insertion protein HypA4e-0753.5
NC_008340:2272692:229322722932272293568342Alkalilimnicola ehrlichei MLHE-1, complete genomehydrogenase nickel insertion protein HypA9e-0752.4
NC_009801:3013838:301383830138383014188351Escherichia coli E24377A, complete genomehydrogenase nickel insertion protein HypA4e-0650.1
NC_009720:2424975:244192324419232442264342Xanthobacter autotrophicus Py2, complete genomehydrogenase nickel insertion protein HypA5e-0649.7