Pre_GI: BLASTP Hits

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Query: NC_009092:1127000:1134636 Shewanella loihica PV-4, complete genome

Start: 1134636, End: 1135988, Length: 1353

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015385:2135456:2140958214095821422681311Treponema succinifaciens DSM 2489 chromosome, complete genome6-aminohexanoate-dimer hydrolase3e-35149
NC_010002:5691968:5707665570766557089931329Delftia acidovorans SPH-1, complete genome6-aminohexanoate-dimer hydrolase3e-31136
NC_012721:770651:8130348130348141971164Burkholderia glumae BGR1 chromosome 2, complete genomeBeta-lactamase class C-like penicillin binding protein3e-1583.2
NC_009656:475465:4834424834424847911350Pseudomonas aeruginosa PA7 chromosome, complete genome6-aminohexanoate-dimer hydrolase4e-1376.6
NC_002516:2436304:2449554244955424507651212Pseudomonas aeruginosa PAO1, complete genomehypothetical protein1e-1274.7
NC_015703:1087809:1111283111128311124491167Runella slithyformis DSM 19594 chromosome, complete genomebeta-lactamase2e-1273.9
NC_014759:2598515:2602109260210926032391131Marivirga tractuosa DSM 4126 chromosome, complete genomebeta-lactamase5e-1066.2
NC_009615:2674631:2674631267463126758241194Parabacteroides distasonis ATCC 8503 chromosome, complete genomebeta-lactamase4e-0963.2
NC_020211:3535622:3545232354523235465391308Serratia marcescens WW4, complete genomebeta-lactamase8e-0962
NC_010001:232976:2351862351862366161431Clostridium phytofermentans ISDg, complete genomebeta-lactamase9e-0858.5
NC_013235:402819:4080774080774092221146Nakamurella multipartita DSM 44233, complete genomebeta-lactamase3e-0757
NC_013929:4807910:4810032481003248112131182Streptomyces scabiei 87.22 chromosome, complete genomepeptidase7e-0755.5
NC_013757:2630000:2641547264154726427971251Geodermatophilus obscurus DSM 43160, complete genomebeta-lactamase3e-0653.5