Pre_GI: BLASTP Hits

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Query: NC_009012:75000:90212 Clostridium thermocellum ATCC 27405, complete genome

Start: 90212, End: 90982, Length: 771

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:3295008:331504633150463315828783Clostridium clariflavum DSM 19732 chromosome, complete genomeRNA polymerase sigma-I factor1e-77290
NC_016627:1213357:123284412328441233632789Clostridium clariflavum DSM 19732 chromosome, complete genomeRNA polymerase sigma-I factor1e-40166
NC_013385:1064188:106350810635081064191684Ammonifex degensii KC4, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily5e-28124
NC_015589:2100175:211625921162592116996738Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRNA polymerase sigma-I factor1e-27123
NC_007907:960104:998092998092998823732Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-26120
NC_007907:5104476:512346651234665124203738Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-26117
NC_009012:2953638:298996129899612990668708Clostridium thermocellum ATCC 27405, complete genomeDNA-directed RNA polymerase sigma factor1e-23110
NC_015565:2508345:253460025346002535310711Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completesigma-70 family RNA polymerase sigma factor7e-21100
NC_010320:1805818:181360918136091813953345Thermoanaerobacter sp. X514 chromosome, complete genomeFliA/WhiG family RNA polymerase sigma factor1e-1170.5
NC_014538:33718:512875128751622336Thermoanaerobacter sp. X513 chromosome, complete genomesigma-70 region 2 domain-containing protein1e-1170.5