Pre_GI: BLASTP Hits

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Query: NC_009012:3421000:3426641 Clostridium thermocellum ATCC 27405, complete genome

Start: 3426641, End: 3427075, Length: 435

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015949:47414:497474974750199453Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeATP-binding region ATPase domain-containing protein9e-23105
NC_014392:2311243:232628223262822326734453Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeATP-binding region ATPase domain protein2e-2097.8
NC_011898:426951:452853452853453287435Clostridium cellulolyticum H10, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase6e-1579.3
NC_008255:4043045:405173540517354052136402Cytophaga hutchinsonii ATCC 33406, complete genomeanti-sigma regulatory factor7e-1062.8
NC_013501:1547508:155138515513851551789405Rhodothermus marinus DSM 4252, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase1e-0858.5
NC_007484:3358000:336376033637603364185426Nitrosococcus oceani ATCC 19707, complete genomeAnti-sigma regulatory factor (Ser/Thr protein kinase4e-0856.6
NC_014315:3207684:321407132140713214496426Nitrosococcus watsoni C-113 chromosome, complete genomeputative anti-sigma regulatory factor1e-0755.1
NC_012225:1775264:178086317808631781294432Brachyspira hyodysenteriae WA1, complete genomeputative anti-sigma factor2e-0651.2
NC_004193:375416:655372655372655848477Oceanobacillus iheyensis HTE831, complete genomeserine-protein kinase RsbW3e-0650.4
NC_017243:314000:328079328079328510432Brachyspira intermedia PWS/A chromosome, complete genomeanti-sigma factor4e-0650.1
NC_010814:2217153:224258522425852243016432Geobacter lovleyi SZ, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase4e-0650.1
NC_010556:2773396:279377327937732794255483Exiguobacterium sibiricum 255-15, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase4e-0650.1