Pre_GI: BLASTP Hits

Some Help

Query: NC_008699:2260606:2262345 Nocardioides sp. JS614, complete genome

Start: 2262345, End: 2263613, Length: 1269

Host Lineage: Nocardioides; Nocardioides; Nocardioidaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This bacterium grows quickly and efficiently on media containing vinyl chloride and ethene. If starved of vinyl chloride for one day, it will not recover for more than 40 days. This strain was placed in the Nocardioides genus on the basis of 16S rRNA analysis.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015711:8852850:8869566886956688708461281Myxococcus fulvus HW-1 chromosome, complete genomeECF subfamily RNA polymerase sigma factor4e-103375
NC_004463:60225:7851178511798031293Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein8e-96350
NC_016591:202342:2164152164152176861272Burkholderia sp. YI23 plasmid byi_2p, complete sequencehypothetical protein1e-95350
NC_017249:60216:8004680046813261281Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-94344
NC_014623:10036628:1005204710052047100533331287Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma-70 factor2e-92339
NC_013159:1885985:1890369189036918916551287Saccharomonospora viridis DSM 43017, complete genomeRNA polymerase, sigma subunit, ECF family3e-90332
NC_018681:441014:4615964615964628731278Nocardia brasiliensis ATCC 700358 chromosome, complete genomesigma factor1e-85317
NC_014391:6640327:6640327664032766415471221Micromonospora aurantiaca ATCC 27029 chromosome, complete genomesigma-70 family RNA polymerase2e-73276
NC_014815:2639339:2649726264972626509461221Micromonospora sp. L5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily6e-70265
NC_015434:5434500:5449124544912454503471224Verrucosispora maris AB-18-032 chromosome, complete genomeputative RNA polymerase, sigma-24 subunit, ECF subfamily protein2e-67256
NC_013889:1623697:1623697162369716250131317Thioalkalivibrio sp. K90mix chromosome, complete genomeputative RNA polymerase, sigma-24 subunit, ECF subfamily2e-66253
NC_018750:4728870:4732837473283747340781242Streptomyces venezuelae ATCC 10712, complete genomeRNA polymerase sigma-70 factor, ECF subfamily4e-66252
NC_017093:6461486:6481348648134864826281281Actinoplanes missouriensis 431, complete genomeputative RNA polymerase ECF-subfamily sigma factor3e-65249
NC_014623:8930235:8943502894350289447731272Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor4e-65248
NC_008027:4280000:4283709428370942849471239Pseudomonas entomophila L48, complete genomeRNA polymerase sigma-70 factor, ECF subfamily5e-65248
NC_019902:3644000:3645711364571136470721362Thioalkalivibrio nitratireducens DSM 14787, complete genomeRNA polymerase sigma-70 factor, ECF subfamily8e-64244
NC_014210:2277971:2296055229605522973741320Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,putative RNA polymerase, sigma-24 subunit, ECF subfamily3e-63243
NC_013729:4835452:4850986485098648522211236Kribbella flavida DSM 17836, complete genomeputative RNA polymerase, sigma-24 subunit, ECF subfamily2e-63243
NC_019673:1384795:1390302139030213915101209Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-62239
NC_019673:189487:2035772035772047401164Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-60233
NC_009380:3043140:3057393305739330587031311Salinispora tropica CNB-440 chromosome, complete genomesigma-70 region 4 domain-containing protein2e-58227
NC_010397:4533089:4535518453551845367441227Mycobacterium abscessus chromosome Chromosome, complete sequenceRNA polymerase sigma-70 factor, ECF subfamily6e-58224
NC_018681:867230:8660168660168672331218Nocardia brasiliensis ATCC 700358 chromosome, complete genomeRNA polymerase ECF-type sigma factor4e-57222
NC_017955:3731480:3820291382029138215471257Modestobacter marinus, complete genomeRNA polymerase sigma factor2e-56219
NC_019904:5130458:5137186513718651384301245Echinicola vietnamensis DSM 17526 chromosome, complete genomeRNA polymerase sigma factor containing a TPR repeat domain9e-48191
NC_008255:2839147:2846183284618328474331251Cytophaga hutchinsonii ATCC 33406, complete genomeprobable sigma-70 factor, ECF subfamily2e-44180
NC_014391:3596812:3596812359681235978461035Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeSigma-70 region 4 type 26e-44178
NC_017030:158947:1621281621281633691242Corallococcus coralloides DSM 2259 chromosome, complete genomeRNA polymerase sigma-70 factor2C ECF subfamily3e-41169
NC_006361:1547034:1565536156553615667681233Nocardia farcinica IFM 10152, complete genomeputative sigma factor4e-33142
NC_018524:4988810:501475850147585015384627Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomesigma-70 region 2 family protein2e-1790.9
NC_008314:1955793:196331919633191963837519Ralstonia eutropha H16 chromosome 2, complete sequenceDNA-directed RNA polymerase sigma subunit PrtI (ECF sigma factor)9e-0755.1
NC_015957:336500:352252352252352833582Streptomyces violaceusniger Tu 4113 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0653.1
NC_009076:75535:782997829978814516Burkholderia pseudomallei 1106a chromosome I, complete sequenceRNA polymerase sigma factor, sigma-70 family4e-0653.1
NC_007651:72952:757787577876293516Burkholderia thailandensis E264 chromosome I, complete sequenceRNA polymerase sigma-70 factor, ECF subfamily9e-0652