Pre_GI: BLASTP Hits

Some Help

Query: NC_008686:1472899:1476066 Paracoccus denitrificans PD1222 chromosome 1, complete sequence

Start: 1476066, End: 1476608, Length: 543

Host Lineage: Paracoccus denitrificans; Paracoccus; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This organism is commonly found in soil and sewage sludge. This organism is able to survive in both aerobic and anaerobic environments due to its ability to use both oxygen and nitrogenous oxides making it a popular model organism for the study of electron transfer and and energy conservation.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009668:445134:513800513800514345546Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceconjugal transfer protein precursor7e-75279
NC_014834:872924:894178894178894723546Rhodopseudomonas palustris DX-1 chromosome, complete genomeconjugative transfer signal peptidase TraF3e-59227
NC_009720:622262:655257655257655802546Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein precursor5e-52203
NC_009720:4406991:444132044413204441865546Xanthobacter autotrophicus Py2, complete genomepeptidase S26C conjugative transfer signal peptidase TraF2e-51201
NC_007925:3933765:395422639542263954771546Rhodopseudomonas palustris BisB18, complete genomeconjugal transfer protein precursor1e-50199
NC_017249:18493:428124281243357546Bradyrhizobium japonicum USDA 6, complete genomeconjugal transfer protein precursor8e-45179
NC_004463:18497:428204282043365546Bradyrhizobium japonicum USDA 110, complete genomeconjugal transfer protein precursor8e-45179
NC_017249:3119000:312008131200813120593513Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-43173
NC_011365:1135750:116187311618731162415543Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeputative conjugal transfer protein TraF2e-39161
NC_016027:2512297:251408825140882514717630Gluconacetobacter xylinus NBRC 3288, complete genomeconjugal transfer protein precursor8e-35146
NC_010125:381711:398827398827399456630Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein TraF3e-33141
NC_015186:2908387:291388729138872914426540Acidiphilium multivorum AIU301, complete genomeputative conjugal transfer protein TraF4e-29127
NC_015556:2265940:228680622868062287333528Pseudomonas fulva 12-X chromosome, complete genomePeptidase S26, conserved region5e-26117
NC_014100:2782000:279994627999462800458513Caulobacter segnis ATCC 21756 chromosome, complete genomepeptidase S26, conserved region1e-25115
NC_010338:2443765:244452124445212445039519Caulobacter sp. K31, complete genomeType IV secretory pathway protease TraF-like protein5e-24110
NC_014414:2540189:254347825434782544173696Parvularcula bermudensis HTCC2503 chromosome, complete genomeconjugal transfer protein3e-22104
NC_008577:1455000:148007914800791480666588Shewanella sp. ANA-3 chromosome 1, complete sequenceputative conjugal transfer TRAF transmembrane protein5e-21100
NC_014910:242845:262595262595263194600Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s26, conserved region protein4e-21100
NC_015381:2859000:289326828932682893870603Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-2098.6
NC_009719:1972545:197197919719791972557579Parvibaculum lavamentivorans DS-1 chromosome, complete genomeplasmid transfer protein TraF2e-2098.2
NC_010943:1332243:134805613480561348631576Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane anchor conjugal transfer protein3e-2098.2
NC_016147:1961000:199013719901371990736600Pseudoxanthomonas spadix BD-a59 chromosome, complete genometype IV secretion system protein8e-2096.7
NC_008752:725189:749121749121749732612Acidovorax avenae subsp. citrulli AAC00-1, complete genomeputative conjugal transfer TRAF transmembrane protein3e-1890.9
NC_012982:711122:728334728334728825492Hirschia baltica ATCC 49814, complete genomeplasmid transfer protein TraF9e-1889.7
NC_003295:2787371:280686628068662807465600Ralstonia solanacearum GMI1000, complete genomePROBABLE CONJUGAL TRANSFER TRAF TRANSMEMBRANE PROTEIN1e-1789
NC_010170:4800000:482394348239434824533591Bordetella petrii, complete genomeconjugal transfer protein TraF6e-1787
NC_014500:842493:867251867251867796546Dickeya dadantii 3937 chromosome, complete genometype IV secretory pathway, protease TraF6e-1683.6
NC_006526:1976779:199656919965691997324756Zymomonas mobilis subsp. mobilis ZM4, complete genomeconjugal transfer protein5e-1063.9
NC_011059:670345:670345670345671007663Prosthecochloris aestuarii DSM 271, complete genomeputative conjugal transfer protein TraF6e-1063.5
NC_011991:65368:694356943569968534Agrobacterium vitis S4 plasmid pAtS4b, complete sequenceconjugative transfer signal peptidase TraF3e-0961.2
NC_015221:12389:337623376234301540Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequenceconjugative transfer signal peptidase TraF3e-0858.2
NC_006371:1743982:176795617679561768483528Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical conjugal transfer protein TraF3e-0857.8
NC_019757:1309766:131088013108801311452573Cylindrospermum stagnale PCC 7417, complete genomesignal peptidase I3e-0754.7