Pre_GI: BLASTP Hits

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Query: NC_008593:1917118:1941256 Clostridium novyi NT, complete genome

Start: 1941256, End: 1942560, Length: 1305

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2144639:2166985216698521682891305Clostridium botulinum BKT015925 chromosome, complete genomeNa+/H+ antiporter family protein6e-160563
NC_013416:1783349:1804251180425118056031353Aggregatibacter actinomycetemcomitans D11S-1, complete genomeNa+/H+ antiporter NhaC8e-65248
NC_016513:16721:2982029820311721353Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeNa+/H+ antiporter NhaC2e-64246
NC_007164:547654:5652775652775666321356Corynebacterium jeikeium K411, complete genomehypothetical protein7e-64244
NC_009524:1627414:1639382163938216406981317Psychrobacter sp. PRwf-1 chromosome, complete genomeNa+/H+ antiporter NhaC2e-54213