Pre_GI: BLASTP Hits

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Query: NC_008593:1917118:1931623 Clostridium novyi NT, complete genome

Start: 1931623, End: 1932624, Length: 1002

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014393:1221000:1225011122501112260301020Clostridium cellulovorans 743B chromosome, complete genomesulfite reductase, subunit A1e-133476
NC_010674:3141228:3141228314122831422381011Clostridium botulinum B str. Eklund 17B, complete genomesulfite reductase, subunit A7e-124443
NC_013517:599949:6019896019896030141026Sebaldella termitidis ATCC 33386, complete genomesulfite reductase, subunit A4e-122437
NC_019978:1244000:1262879126287912638891011Halobacteroides halobius DSM 5150, complete genomesulfite reductase, subunit A3e-112405
NC_010337:1999405:2006708200670820077211014Heliobacterium modesticaldum Ice1, complete genome4fe-4S ferredoxin, iron-sulfur binding protein, putative7e-41167
NC_010718:2860096:2863867286386728649461080Natranaerobius thermophilus JW/NM-WN-LF, complete genomeputative anaerobic sulfite reductase, A subunit2e-38160
NC_013926:71186:8128881288823071020Aciduliprofundum boonei T469 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein6e-38158
NC_014220:2102000:2103255210325521042711017Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome4Fe-4S ferredoxin, iron-sulfur binding protein2e-35150
NC_014633:681198:6899436899436909801038Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence4Fe-4S ferredoxin7e-35148
NC_009253:139014:1585491585491595531005Desulfotomaculum reducens MI-1 chromosome, complete genome4Fe-4S ferredoxin4e-34145
NC_009253:139014:1505111505111515151005Desulfotomaculum reducens MI-1 chromosome, complete genome4Fe-4S ferredoxin4e-34145
NC_015474:1432065:1432065143206514330691005Pyrococcus sp. NA2 chromosome, complete genomehydrogenase (cytochrome-c3 hydrogenase beta chain)7e-32138
NC_008576:1061171:1078439107843910794881050Magnetococcus sp. MC-1, complete genome4Fe-4S ferredoxin, iron-sulfur binding domain protein3e-31136
NC_003413:857480:8637548637548648571104Pyrococcus furiosus DSM 3638, complete genomesulfhydrogenase beta subunit5e-31135
NC_015565:128350:1493351493351503391005Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete4Fe-4S ferredoxin iron-sulfur binding domain-containing protein9e-31134
NC_015565:128350:1410171410171420211005Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete4Fe-4S ferredoxin iron-sulfur binding domain-containing protein1e-30134
NC_013223:2609697:2628520262852026295691050Desulfohalobium retbaense DSM 5692, complete genomeiron-sulfur binding protein4e-29129
NC_014365:2359760:2366419236641923674471029Desulfarculus baarsii DSM 2075 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein8e-29127
NC_015385:1406419:1416939141693914179761038Treponema succinifaciens DSM 2489 chromosome, complete genome4Fe-4S ferredoxin, iron-sulfur binding protein2e-26120
NC_011027:1024995:1040466104046610414791014Chlorobaculum parvum NCIB 8327, complete genomehydrogenase/sulfur reductase, beta subunit3e-25116
NC_015573:2900906:2911926291192629148832958Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome2e-24113
NC_013595:5333000:5343782534378253448551074Streptosporangium roseum DSM 43021, complete genome4Fe-4S ferredoxin, iron-sulfur binding protein2e-22106
NC_010336:852915:8664658664658675651101Francisella philomiragia subsp. philomiragia ATCC 25017, completecytochrome c3 hydrogenase alpha (or beta) chain3e-22105