Pre_GI: BLASTP Hits

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Query: NC_008593:1797000:1810691 Clostridium novyi NT, complete genome

Start: 1810691, End: 1811137, Length: 447

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2024154:203615420361542036600447Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein9e-47185
NC_021182:3409199:342116034211603421606447Clostridium pasteurianum BC1, complete genomehypothetical protein7e-2095.9
NC_003030:1097625:110450711045071104953447Clostridium acetobutylicum ATCC 824, complete genomehypothetical protein2e-1374.7
NC_015687:1097447:110432911043291104775447Clostridium acetobutylicum DSM 1731 chromosome, complete genomehypothetical protein2e-1374.7