Pre_GI: BLASTP Hits

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Query: NC_008563:3332114:3337006 Escherichia coli APEC O1, complete genome

Start: 3337006, End: 3337275, Length: 270

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:3245500:325179032517903252098309Escherichia coli S88 chromosome, complete genomehypothetical protein3e-46183
NC_004431:4955658:496185449618544962162309Escherichia coli CFT073, complete genomehypothetical protein3e-46183
CU928145:3360967:339271733927173393025309Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative transcriptional regulator4e-46182
NC_011748:3360967:339271733927173393025309Escherichia coli 55989, complete genomeconserved hypothetical protein; putative transcriptional regulator4e-46182
NC_016860:332087:347876347876348136261Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1891.7
NC_016856:332771:348560348560348820261Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-1891.7
NC_010102:2762304:276916727691672769382216Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1890.9
NC_015663:1869000:186926818692681869555288Enterobacter aerogenes KCTC 2190 chromosome, complete genomePerC transcriptional activator1e-1271.6
NC_016831:2667561:267637226763722676521150Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-0753.1