Pre_GI: BLASTP Hits

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Query: NC_008544:615448:640085 Burkholderia cenocepacia HI2424 chromosome 3, complete sequence

Start: 640085, End: 640900, Length: 816

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010512:1196616:122261312226131223428816Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceLinocin_M18 bacteriocin protein1e-150531
NC_015723:961909:972332972332973150819Cupriavidus necator N-1 chromosome 2, complete sequencelinocin-M181e-119429
NC_013209:2337204:234000523400052340799795Acetobacter pasteurianus IFO 3283-01, complete genomelinocin M18 bacteriocin protein2e-86319
NC_017100:2339826:234262723426272343421795Acetobacter pasteurianus IFO 3283-03, complete genomelinocin M18 bacteriocin protein2e-86319
NC_017108:2337163:233996423399642340758795Acetobacter pasteurianus IFO 3283-12, complete genomelinocin M18 bacteriocin protein2e-86319
NC_017111:2337181:233998223399822340776795Acetobacter pasteurianus IFO 3283-32, complete genomelinocin M18 bacteriocin protein2e-86319
NC_017121:2337168:233996923399692340763795Acetobacter pasteurianus IFO 3283-07, complete genomelinocin M18 bacteriocin protein2e-86319
NC_017125:2339806:234260723426072343401795Acetobacter pasteurianus IFO 3283-22, complete genomelinocin M18 bacteriocin protein2e-86319
NC_017146:2339848:234264923426492343443795Acetobacter pasteurianus IFO 3283-26, complete genomelinocin M18 bacteriocin protein2e-86319
NC_017150:2244950:224775122477512248545795Acetobacter pasteurianus IFO 3283-01-42C, complete genomelinocin M18 bacteriocin protein2e-86319
NC_016582:175589:193534193534194376843Streptomyces bingchenggensis BCW-1 chromosome, complete genomeantigen cfp297e-85313
NC_016027:229180:259123259123259917795Gluconacetobacter xylinus NBRC 3288, complete genomelinocin M18 bacteriocin protein2e-83308
NC_014654:895298:903773903773904573801Halanaerobium sp. 'sapolanicus' chromosome, complete genomeLinocin_M18 bacteriocin protein1e-35150
NC_014720:2420455:242350024235002424294795Caldicellulosiruptor kronotskyensis 2002 chromosome, completelinocin_m18 bacteriocin protein2e-1273.2
NC_021171:1661923:168097716809771681825849Bacillus sp. 1NLA3E, complete genomeLinocin_M18 bacteriocin protein8e-0960.8
NC_013204:3491441:350288935028893503701813Eggerthella lenta DSM 2243, complete genomeLinocin_M18 bacteriocin protein2e-0756.6
NC_018607:2472250:249631624963162497125810Brachyspira pilosicoli B2904 chromosome, complete genomelinocin M18 bacteriocin protein2e-0653.5
NC_019908:1565500:158803015880301588839810Brachyspira pilosicoli P43/6/78 chromosome, complete genomelinocin M18 bacteriocin protein2e-0653.5