Pre_GI: BLASTP Hits

Some Help

Query: NC_008543:323773:338185 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 338185, End: 338784, Length: 600

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011001:568970:582803582803583390588Burkholderia cenocepacia J2315 chromosome 2, complete sequencepyridoxamine 5'-phosphate oxidase family protein2e-100364
NC_012721:240000:262748262748263323576Burkholderia glumae BGR1 chromosome 2, complete genomePyridoxamine 5'-phosphate oxidase-related, FMN-binding protein5e-51200
NC_014414:2467639:247366824736682474231564Parvularcula bermudensis HTCC2503 chromosome, complete genomePyridoxamine 5'-phosphate oxidase-related, FMN-binding protein2e-22105
NC_012108:4937000:494381649438164944430615Desulfobacterium autotrophicum HRM2, complete genomeputative pyridoxamine-phosphate oxidase4e-1581.3
NC_020911:4428000:444266844426684443237570Octadecabacter antarcticus 307, complete genomeputative pyridoxine/pyridoxamine 5'-phosphate oxidase8e-1167
NC_005070:837567:839671839671840237567Synechococcus sp. WH 8102, complete genomehypothetical protein4e-1064.7
NC_007513:1388641:141734214173421417911570Synechococcus sp. CC9902, complete genomehypothetical protein6e-0650.8