Pre_GI: BLASTP Hits

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Query: NC_008542:1727000:1736077 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 1736077, End: 1736400, Length: 324

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008060:1182378:119139211913921191715324Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceC-5 cytosine-specific DNA methylase1e-54211
NC_010508:1705500:171459317145931714919327Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence1e-54211
NC_010322:1336231:1343643134364313453221680Pseudomonas putida GB-1 chromosome, complete genomeC-5 cytosine-specific DNA methylase2e-27120
NC_011894:3029964:3029964302996430320422079Methylobacterium nodulans ORS 2060, complete genomeC-5 cytosine-specific DNA methylase2e-23107
NC_004129:2201780:2209446220944622111791734Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-21101