Pre_GI: BLASTP Hits

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Query: NC_008530:1454118:1469042 Lactobacillus gasseri ATCC 33323, complete genome

Start: 1469042, End: 1469509, Length: 468

Host Lineage: Lactobacillus gasseri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus gasseri ATCC 33323 is a human isolate and is the type strain. This organism has been shown to have probiotic activities such as production of bacteriocins, macrophage stimulation and adherence to intestinal tissues. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus gasseri is a rod-shaped, gram-positive anaerobe. Of the lactobacilli, it is the most amenable to DNA introduction and manipulation which should prove useful in the functional genomic analysis of this species. It has been shown to be an effective probiotic in suppressing Helicobacter pylori infections in humans.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015697:468234:479190479190479657468Lactobacillus reuteri SD2112 chromosome, complete genomerestriction endonuclease2e-78291
NC_015697:506494:520184520184520651468Lactobacillus reuteri SD2112 chromosome, complete genomerestriction endonuclease4e-76283
NC_010320:1268355:128252412825241282982459Thermoanaerobacter sp. X514 chromosome, complete genomehypothetical protein8e-30129
NC_016627:4203775:423078342307834231238456Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein9e-27119
NC_016627:4323370:435704143570414357496456Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein1e-26119
NC_009012:1934107:197034619703461970801456Clostridium thermocellum ATCC 27405, complete genomeconserved hypothetical phage-associated protein1e-26118
NC_021064:816000:822958822958823419462Propionibacterium avidum 44067, complete genomephage-associated protein3e-2097.1
NC_021064:1211480:121988512198851220346462Propionibacterium avidum 44067, complete genomephage-associated protein2e-1994.4
NC_010337:2848360:289223928922392892688450Heliobacterium modesticaldum Ice1, complete genomehypothetical protein2e-1788.6
NC_015520:2974048:299411729941172994566450Mahella australiensis 50-1 BON chromosome, complete genomehypothetical protein3e-1787.4